Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr14:79224551-79225250	A549	lung:	n/a	chr14:79224856-79224865
2	CTCF	chr14:79224238-79225262	SK-N-SH	brain:	n/a	chr14:79224856-79224865
3	CTCF	chr14:79224440-79224590	SAEC	small airway:	n/a	n/a
4	RAD21	chr14:79224390-79225146	SK-N-SH	brain:	n/a	n/a
5	CTCF	chr14:79224586-79225067	GM12878	blood:	n/a	chr14:79224856-79224865
6	RAD21	chr14:79224574-79225027	H1-hESC	embryonic stem cell:	n/a	n/a
7	CTCF	chr14:79224562-79225076	MCF-7	breast:	n/a	chr14:79224856-79224865
8	CTCF	chr14:79224580-79224730	HFF-Myc	foreskin:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:79223354..79225389-chr14:79226085..79228810,2	K562	blood:

Variant related genes	Relation type
ENSG00000258478	TF binding region

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10129219	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10137393	1.00[CEU][hapmap];0.89[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10145149	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10149743	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17108215	0.81[CEU][hapmap]
rs6574470	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7141042	0.94[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs7141475	0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs71414767	0.83[ASN][1000 genomes]
rs7142344	0.95[CHB][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs7145730	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7149051	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7150361	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8004449	0.81[AMR][1000 genomes]
rs8012678	0.82[CHB][hapmap];0.83[ASN][1000 genomes]
rs8020920	0.81[AMR][1000 genomes]
rs929920	1.00[CEU][hapmap];0.89[JPT][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs929921	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs987644	0.94[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9972280	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79219600-79224800	Weak transcription	Brain Angular Gyrus	brain
2	chr14:79222400-79224600	Weak transcription	GM12878-XiMat	blood
3	chr14:79222800-79224800	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr14:79223000-79225200	Enhancers	Brain Substantia Nigra	brain
5	chr14:79223200-79224800	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr14:79223200-79230400	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr14:79223400-79225200	Enhancers	Brain Hippocampus Middle	brain
8	chr14:79224000-79230000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr14:79224200-79226200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr14:79224400-79225200	Enhancers	Brain Cingulate Gyrus	brain
11	chr14:79224400-79225200	Enhancers	Brain Inferior Temporal Lobe	brain

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