Variant report

Variant	rs10151837
Chromosome Location	chr14:31751498-31751499
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10135068	0.84[AFR][1000 genomes]
rs10146436	0.90[AMR][1000 genomes]
rs10148667	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10151215	0.84[AFR][1000 genomes]
rs10151624	0.81[AFR][1000 genomes]
rs10782377	0.81[AMR][1000 genomes]
rs17091513	0.98[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17555805	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2378861	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs28548120	0.84[AFR][1000 genomes]
rs28623024	0.84[AFR][1000 genomes]
rs4981843	0.88[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs58291808	0.84[AFR][1000 genomes]
rs6571419	0.81[AMR][1000 genomes]
rs6571422	0.83[AMR][1000 genomes]
rs7150876	0.81[AMR][1000 genomes]
rs7151099	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901587	chr14:31501505-31752664	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	esv2830427	chr14:31639110-32000034	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv1050597	chr14:31711248-31904761	Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31743600-31753000	Weak transcription	Osteobl	bone
2	chr14:31746600-31755400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr14:31749400-31789000	Weak transcription	Psoas Muscle	Psoas
4	chr14:31750600-31753000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr14:31751400-31752400	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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