The 2.0 version of rSNPBase

Variant report

Variant rs10157111
Chromosome Location chr1:10613344-10613345
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10589400-10664800 Weak transcription Aorta Aorta
2 chr1:10591000-10639400 Weak transcription Hela-S3 cervix
3 chr1:10591400-10629200 Weak transcription Primary hematopoietic stem cells blood
4 chr1:10591600-10616000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:10592200-10615800 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr1:10598600-10621800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:10600000-10615600 Weak transcription Muscle Satellite Cultured Cells --
8 chr1:10600000-10615800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:10600000-10619600 Weak transcription Brain Substantia Nigra brain
10 chr1:10600200-10614800 Weak transcription Brain Angular Gyrus brain
11 chr1:10600200-10615800 Weak transcription HSMM muscle
12 chr1:10601200-10613400 Weak transcription Osteobl bone
13 chr1:10601200-10619600 Weak transcription Brain Anterior Caudate brain
14 chr1:10601400-10615600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:10601800-10613400 Weak transcription Right Ventricle heart
16 chr1:10602000-10615600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:10602000-10615600 Weak transcription HMEC breast
18 chr1:10602000-10616200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:10602000-10619400 Weak transcription Brain Hippocampus Middle brain
20 chr1:10602000-10639600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:10602200-10615600 Weak transcription Placenta Placenta
22 chr1:10602200-10615600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:10602400-10613600 Weak transcription Primary B cells from peripheral blood blood
24 chr1:10602400-10615600 Weak transcription Fetal Muscle Leg muscle
25 chr1:10602400-10616000 Weak transcription Adipose Nuclei Adipose
26 chr1:10602600-10615400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:10602600-10615600 Weak transcription HSMMtube muscle
28 chr1:10602600-10619400 Weak transcription NHEK skin
29 chr1:10602600-10624000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:10602800-10615800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:10603000-10659000 Weak transcription Primary B cells from cord blood blood
32 chr1:10603200-10615800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:10603800-10616000 Weak transcription Spleen Spleen
34 chr1:10604000-10613800 Weak transcription Esophagus oesophagus
35 chr1:10604000-10615000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:10604600-10619600 Weak transcription Thymus Thymus
37 chr1:10604600-10621400 Weak transcription Dnd41 blood
38 chr1:10604600-10623800 Weak transcription Duodenum Mucosa Duodenum
39 chr1:10604800-10621200 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr1:10605000-10659000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:10605200-10615200 Weak transcription Primary T cells fromperipheralblood blood
42 chr1:10605400-10621200 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr1:10606000-10638000 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:10607200-10619600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:10607400-10615800 Weak transcription Left Ventricle heart
46 chr1:10607600-10613400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:10607600-10613600 Weak transcription Liver Liver
48 chr1:10607600-10614400 Weak transcription Rectal Smooth Muscle rectum
49 chr1:10607600-10615000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:10607600-10615800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015