The 2.0 version of rSNPBase

Variant report

Variant rs11121593
Chromosome Location chr1:10626287-10626288
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10589400-10664800 Weak transcription Aorta Aorta
2 chr1:10591000-10639400 Weak transcription Hela-S3 cervix
3 chr1:10591400-10629200 Weak transcription Primary hematopoietic stem cells blood
4 chr1:10602000-10639600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:10603000-10659000 Weak transcription Primary B cells from cord blood blood
6 chr1:10605000-10659000 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr1:10606000-10638000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:10607600-10636800 Weak transcription Primary T cells from cord blood blood
9 chr1:10607600-10636800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:10607600-10641400 Weak transcription Lung lung
11 chr1:10616400-10633600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:10616400-10638200 Weak transcription Esophagus oesophagus
13 chr1:10616800-10627200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:10617000-10627000 Weak transcription HSMMtube muscle
15 chr1:10622800-10634800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:10623600-10645600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:10624600-10636800 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr1:10624800-10628600 Weak transcription Fetal Intestine Small intestine
19 chr1:10624800-10629400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:10624800-10629400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:10624800-10629600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:10624800-10629600 Weak transcription Primary B cells from peripheral blood blood
23 chr1:10624800-10634800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:10624800-10646000 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:10625400-10626400 Enhancers Liver Liver
26 chr1:10626000-10637800 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015