Variant report

Variant	rs10162511
Chromosome Location	chr14:63230251-63230252
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11626516	0.88[ASN][1000 genomes]
rs11844092	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11848421	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11851665	0.94[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs11851948	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs1809676	0.88[ASN][1000 genomes]
rs1844511	0.88[ASN][1000 genomes]
rs1873274	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1971271	0.86[ASN][1000 genomes]
rs1977631	0.97[ASN][1000 genomes]
rs6573461	0.83[EUR][1000 genomes]
rs7152953	0.92[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7154517	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs7161467	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs761855	0.91[ASN][1000 genomes]
rs8005419	0.88[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63227000-63230600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr14:63227200-63235600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr14:63227200-63246400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr14:63227400-63232200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr14:63229200-63230800	Weak transcription	H1 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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