Variant report

Variant	rs10167651
Chromosome Location	chr2:180563909-180563910
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10168158	0.98[EUR][1000 genomes]
rs10187687	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10190718	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10497546	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10497547	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11889892	0.81[ASN][1000 genomes]
rs11897834	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11903667	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12463735	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12465360	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs13412593	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1399690	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1515285	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1515293	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1554105	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1606817	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16866924	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16866929	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28469228	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28615198	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6433801	0.98[EUR][1000 genomes]
rs6708429	0.81[ASN][1000 genomes]
rs6708458	0.81[ASN][1000 genomes]
rs6730056	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6760409	0.82[EUR][1000 genomes]
rs72958954	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72958970	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72958973	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7569504	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7570893	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180540400-180571200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:180552400-180566400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr2:180556400-180566000	Weak transcription	HSMM	muscle

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