Variant report

Variant	rs10168877
Chromosome Location	chr2:58531296-58531297
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10178765	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10490249	0.82[EUR][1000 genomes]
rs10490250	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11125748	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1156588	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11891166	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11891414	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12151813	0.82[EUR][1000 genomes]
rs12615658	0.82[EUR][1000 genomes]
rs12713381	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13399274	0.82[EUR][1000 genomes]
rs13412643	0.82[EUR][1000 genomes]
rs2215960	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2861377	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34574366	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34692015	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35459416	0.83[ASN][1000 genomes]
rs60851549	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs725451	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs725452	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7594908	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7595474	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9646985	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:58520600-58531800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links