The 2.0 version of rSNPBase

Variant report

Variant rs10173593
Chromosome Location chr2:191108091-191108092
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191052000-191108800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:191056800-191124600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:191056800-191131800 Weak transcription NHEK skin
4 chr2:191060800-191180000 Weak transcription Small Intestine intestine
5 chr2:191067600-191109200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr2:191073200-191109000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:191079400-191109400 Weak transcription NH-A brain
8 chr2:191081800-191108800 Weak transcription Fetal Heart heart
9 chr2:191089000-191128800 Weak transcription Gastric stomach
10 chr2:191096800-191117400 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr2:191098400-191114800 Weak transcription HUVEC blood vessel
12 chr2:191099400-191131800 Weak transcription HMEC breast
13 chr2:191100000-191122400 Weak transcription Colonic Mucosa Colon
14 chr2:191100000-191150400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr2:191100400-191128000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:191101800-191108200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr2:191104400-191151000 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr2:191105000-191180000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr2:191105400-191108800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
20 chr2:191105800-191108800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr2:191105800-191115200 Weak transcription Psoas Muscle Psoas
22 chr2:191106000-191108800 ZNF genes & repeats Primary hematopoietic stem cells blood
23 chr2:191106000-191117200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:191106200-191108200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
25 chr2:191106200-191109600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:191106200-191109800 Strong transcription Placenta Placenta
27 chr2:191106200-191110000 Strong transcription Cortex derived primary cultured neurospheres brain
28 chr2:191106200-191110000 Strong transcription Skeletal Muscle Female skeletal muscle
29 chr2:191106200-191117200 Strong transcription Liver Liver
30 chr2:191106200-191117400 Strong transcription Adipose Nuclei Adipose
31 chr2:191106200-191132200 Weak transcription Hela-S3 cervix
32 chr2:191106400-191109800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr2:191106400-191110000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr2:191106400-191110000 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr2:191106600-191108200 Strong transcription Muscle Satellite Cultured Cells --
36 chr2:191106600-191108800 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr2:191106600-191108800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr2:191106600-191109600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr2:191106600-191109600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr2:191106600-191109600 Strong transcription Brain Substantia Nigra brain
41 chr2:191106600-191109600 Strong transcription Fetal Stomach stomach
42 chr2:191106600-191109800 Strong transcription Primary T cells fromperipheralblood blood
43 chr2:191106600-191109800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:191106600-191109800 Strong transcription Duodenum Mucosa Duodenum
45 chr2:191106600-191109800 Strong transcription Fetal Muscle Trunk muscle
46 chr2:191106600-191109800 Strong transcription Fetal Thymus thymus
47 chr2:191106600-191110200 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr2:191106600-191111800 Strong transcription Ovary ovary
49 chr2:191106600-191113200 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr2:191106600-191117200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015