The 2.0 version of rSNPBase

Variant report

Variant rs56853355
Chromosome Location chr2:191089358-191089359
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191052000-191108800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:191056800-191124600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:191056800-191131800 Weak transcription NHEK skin
4 chr2:191060000-191107000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr2:191060200-191090600 Weak transcription A549 lung
6 chr2:191060800-191180000 Weak transcription Small Intestine intestine
7 chr2:191062400-191107800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:191067600-191109200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr2:191073200-191109000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:191076200-191107200 Weak transcription GM12878-XiMat blood
11 chr2:191077000-191106800 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr2:191077200-191100200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:191079200-191099000 Weak transcription Stomach Smooth Muscle stomach
14 chr2:191079400-191109400 Weak transcription NH-A brain
15 chr2:191079600-191091400 Weak transcription Psoas Muscle Psoas
16 chr2:191079800-191106600 Weak transcription Muscle Satellite Cultured Cells --
17 chr2:191080800-191089800 Weak transcription HSMM muscle
18 chr2:191081000-191107200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr2:191081600-191107400 Weak transcription Colon Smooth Muscle Colon
20 chr2:191081800-191100200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr2:191081800-191108800 Weak transcription Fetal Heart heart
22 chr2:191082000-191096400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr2:191082000-191106600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:191082000-191107000 Weak transcription Brain Cingulate Gyrus brain
25 chr2:191082000-191107000 Weak transcription Left Ventricle heart
26 chr2:191082000-191107200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr2:191082000-191107200 Weak transcription Brain Anterior Caudate brain
28 chr2:191082000-191107800 Weak transcription Pancreas Pancrea
29 chr2:191082600-191107000 Weak transcription Right Ventricle heart
30 chr2:191082800-191107200 Weak transcription Placenta Amnion Placenta Amnion
31 chr2:191083800-191106800 Weak transcription Brain Inferior Temporal Lobe brain
32 chr2:191084800-191106600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:191087000-191091200 Weak transcription Brain Angular Gyrus brain
34 chr2:191087000-191108000 Weak transcription K562 blood
35 chr2:191088000-191089800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr2:191088200-191089800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
37 chr2:191088400-191089400 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr2:191088400-191106800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr2:191088400-191107000 Weak transcription Fetal Brain Male brain
40 chr2:191088600-191094000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr2:191088600-191099600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:191088600-191106800 Weak transcription HepG2 liver
43 chr2:191088800-191099400 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr2:191088800-191106600 Weak transcription Fetal Thymus thymus
45 chr2:191088800-191106800 Weak transcription HSMMtube muscle
46 chr2:191088800-191107400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr2:191089000-191089400 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr2:191089000-191090600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr2:191089000-191094000 Weak transcription Colonic Mucosa Colon
50 chr2:191089000-191097000 Weak transcription Liver Liver

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Last update: Aug 31, 2015