The 2.0 version of rSNPBase

Variant report

Variant rs1866850
Chromosome Location chr2:191150343-191150344
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191060800-191180000 Weak transcription Small Intestine intestine
2 chr2:191100000-191150400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:191104400-191151000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr2:191105000-191180000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr2:191107400-191150600 Weak transcription Rectal Smooth Muscle rectum
6 chr2:191108200-191180000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:191109800-191163000 Weak transcription Brain Germinal Matrix brain
8 chr2:191115600-191162200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr2:191115600-191182000 Weak transcription Brain Cingulate Gyrus brain
10 chr2:191116600-191183200 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr2:191117400-191183600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:191121000-191181400 Weak transcription Brain Angular Gyrus brain
13 chr2:191123200-191177600 Weak transcription Colonic Mucosa Colon
14 chr2:191123400-191150800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr2:191123400-191160000 Weak transcription Ovary ovary
16 chr2:191123600-191155000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr2:191123800-191150600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr2:191123800-191150600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr2:191123800-191155800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr2:191124200-191150400 Weak transcription Esophagus oesophagus
21 chr2:191124400-191153000 Weak transcription Placenta Placenta
22 chr2:191124800-191150400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr2:191125800-191159000 Weak transcription HSMM muscle
24 chr2:191129800-191150400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:191132600-191180200 Weak transcription NH-A brain
26 chr2:191132800-191150600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr2:191135600-191183200 Weak transcription Fetal Brain Male brain
28 chr2:191136000-191150600 Weak transcription H1 Cell Line embryonic stem cell
29 chr2:191137000-191150400 Weak transcription Gastric stomach
30 chr2:191137400-191183200 Weak transcription A549 lung
31 chr2:191137600-191150800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr2:191137600-191154400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr2:191140000-191165600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr2:191141000-191150400 Weak transcription Pancreas Pancrea
35 chr2:191141600-191152400 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr2:191141800-191183000 Weak transcription Placenta Amnion Placenta Amnion
37 chr2:191142400-191173200 Weak transcription NHLF lung
38 chr2:191142600-191150400 Weak transcription Brain Anterior Caudate brain
39 chr2:191142600-191180200 Weak transcription Hela-S3 cervix
40 chr2:191142600-191181200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr2:191143000-191167000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr2:191143000-191183000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:191143200-191162000 Strong transcription Liver Liver
44 chr2:191143400-191150800 Weak transcription K562 blood
45 chr2:191143800-191152800 Strong transcription Fetal Muscle Leg muscle
46 chr2:191144200-191150400 Weak transcription Stomach Smooth Muscle stomach
47 chr2:191144200-191151000 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr2:191144400-191165600 Weak transcription Stomach Mucosa stomach
49 chr2:191145000-191150800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:191145200-191150400 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015