The 2.0 version of rSNPBase

Variant report

Variant rs72627906
Chromosome Location chr2:191220338-191220339
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191209400-191221000 Weak transcription Placenta Placenta
2 chr2:191209400-191222800 Weak transcription Fetal Muscle Trunk muscle
3 chr2:191209400-191224600 Weak transcription Colonic Mucosa Colon
4 chr2:191209800-191223200 Weak transcription Muscle Satellite Cultured Cells --
5 chr2:191209800-191223400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:191209800-191224600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:191209800-191224600 Weak transcription NH-A brain
8 chr2:191210000-191220800 Weak transcription Primary monocytes fromperipheralblood blood
9 chr2:191210000-191221000 Weak transcription Adipose Nuclei Adipose
10 chr2:191210000-191223600 Weak transcription Osteobl bone
11 chr2:191210000-191224400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:191210400-191223400 Weak transcription NHLF lung
13 chr2:191210400-191224200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:191211000-191224200 Weak transcription HUVEC blood vessel
15 chr2:191211400-191238000 Weak transcription Hela-S3 cervix
16 chr2:191212200-191224600 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr2:191214000-191230400 Weak transcription Aorta Aorta
18 chr2:191215400-191220800 Weak transcription Rectal Smooth Muscle rectum
19 chr2:191216600-191221600 Enhancers Stomach Mucosa stomach
20 chr2:191216800-191220400 Enhancers Brain Angular Gyrus brain
21 chr2:191216800-191221000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:191216800-191224600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:191216800-191224600 Enhancers HMEC breast
24 chr2:191217200-191220800 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr2:191217200-191224200 Weak transcription HSMM muscle
26 chr2:191217400-191220800 Weak transcription Stomach Smooth Muscle stomach
27 chr2:191217600-191222800 Enhancers Fetal Intestine Small intestine
28 chr2:191217800-191220800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr2:191217800-191221400 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr2:191217800-191222400 Weak transcription Fetal Lung lung
31 chr2:191218000-191220800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:191218000-191220800 Weak transcription Psoas Muscle Psoas
33 chr2:191218000-191220800 Weak transcription Right Atrium heart
34 chr2:191218000-191220800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr2:191218000-191220800 Weak transcription Spleen Spleen
36 chr2:191218000-191221000 Weak transcription Thymus Thymus
37 chr2:191218200-191220800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr2:191218200-191220800 Weak transcription Left Ventricle heart
39 chr2:191218200-191221800 Enhancers HepG2 liver
40 chr2:191218200-191223600 Weak transcription Fetal Thymus thymus
41 chr2:191218200-191224400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:191218200-191224600 Weak transcription Right Ventricle heart
43 chr2:191218400-191220800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr2:191218400-191220800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:191218400-191223400 Weak transcription Fetal Heart heart
46 chr2:191219200-191220400 Enhancers Brain Hippocampus Middle brain
47 chr2:191219200-191220800 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr2:191219400-191220800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr2:191219400-191220800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr2:191219400-191220800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015