The 2.0 version of rSNPBase

Variant report

Variant rs972689
Chromosome Location chr2:191227492-191227493
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191211400-191238000 Weak transcription Hela-S3 cervix
2 chr2:191214000-191230400 Weak transcription Aorta Aorta
3 chr2:191219400-191234000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:191219600-191243800 Weak transcription Gastric stomach
5 chr2:191223800-191236800 Weak transcription Psoas Muscle Psoas
6 chr2:191224000-191235600 Weak transcription Spleen Spleen
7 chr2:191224200-191230400 Weak transcription Esophagus oesophagus
8 chr2:191224800-191236200 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr2:191225000-191227800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:191225000-191229400 Weak transcription Left Ventricle heart
11 chr2:191225000-191230400 Weak transcription Lung lung
12 chr2:191225000-191232000 Weak transcription Ovary ovary
13 chr2:191225000-191232800 Weak transcription HUVEC blood vessel
14 chr2:191225000-191234200 Weak transcription Right Ventricle heart
15 chr2:191225000-191235600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:191225000-191235600 Weak transcription Pancreas Pancrea
17 chr2:191225000-191236400 Strong transcription Primary monocytes fromperipheralblood blood
18 chr2:191225000-191237400 Weak transcription Fetal Brain Female brain
19 chr2:191225000-191237600 Weak transcription Small Intestine intestine
20 chr2:191225000-191242800 Weak transcription Placenta Placenta
21 chr2:191225200-191227600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr2:191225200-191227800 Weak transcription Duodenum Mucosa Duodenum
23 chr2:191225200-191228600 Weak transcription Fetal Intestine Large intestine
24 chr2:191225200-191229400 Weak transcription Fetal Muscle Leg muscle
25 chr2:191225200-191229600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr2:191225200-191229600 Weak transcription Adipose Nuclei Adipose
27 chr2:191225200-191229800 Weak transcription Fetal Muscle Trunk muscle
28 chr2:191225200-191230000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:191225200-191230400 Weak transcription Fetal Intestine Small intestine
30 chr2:191225200-191230400 Weak transcription Fetal Stomach stomach
31 chr2:191225200-191231000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:191225200-191231000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr2:191225200-191231800 Weak transcription HSMMtube muscle
34 chr2:191225200-191232000 Weak transcription HepG2 liver
35 chr2:191225200-191232000 Weak transcription Osteobl bone
36 chr2:191225200-191233000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:191225200-191233400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr2:191225200-191233800 Weak transcription NHLF lung
39 chr2:191225200-191234400 Weak transcription K562 blood
40 chr2:191225200-191235200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr2:191225200-191235200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr2:191225200-191235600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:191225200-191235600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:191225200-191235600 Weak transcription Colonic Mucosa Colon
45 chr2:191225200-191235800 Weak transcription Primary hematopoietic stem cells blood
46 chr2:191225200-191235800 Weak transcription Brain Germinal Matrix brain
47 chr2:191225200-191236200 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr2:191225200-191236400 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr2:191225200-191236600 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr2:191225200-191236600 Weak transcription NH-A brain

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Last update: Aug 31, 2015