The 2.0 version of rSNPBase

Variant report

Variant rs2067409
Chromosome Location chr2:191225402-191225403
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191211400-191238000 Weak transcription Hela-S3 cervix
2 chr2:191214000-191230400 Weak transcription Aorta Aorta
3 chr2:191219400-191234000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:191219600-191243800 Weak transcription Gastric stomach
5 chr2:191223800-191236800 Weak transcription Psoas Muscle Psoas
6 chr2:191224000-191235600 Weak transcription Spleen Spleen
7 chr2:191224200-191230400 Weak transcription Esophagus oesophagus
8 chr2:191224400-191225600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr2:191224400-191225600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:191224400-191225600 Active TSS Brain Angular Gyrus brain
11 chr2:191224400-191226000 Active TSS Brain Cingulate Gyrus brain
12 chr2:191224400-191227200 Active TSS Brain Inferior Temporal Lobe brain
13 chr2:191224600-191226600 Active TSS Brain Substantia Nigra brain
14 chr2:191224800-191236200 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr2:191225000-191225600 Active TSS Duodenum Smooth Muscle Duodenum
16 chr2:191225000-191227800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:191225000-191229400 Weak transcription Left Ventricle heart
18 chr2:191225000-191230400 Weak transcription Lung lung
19 chr2:191225000-191232000 Weak transcription Ovary ovary
20 chr2:191225000-191232800 Weak transcription HUVEC blood vessel
21 chr2:191225000-191234200 Weak transcription Right Ventricle heart
22 chr2:191225000-191235600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:191225000-191235600 Weak transcription Pancreas Pancrea
24 chr2:191225000-191236400 Strong transcription Primary monocytes fromperipheralblood blood
25 chr2:191225000-191237400 Weak transcription Fetal Brain Female brain
26 chr2:191225000-191237600 Weak transcription Small Intestine intestine
27 chr2:191225000-191242800 Weak transcription Placenta Placenta
28 chr2:191225200-191225600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:191225200-191225600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:191225200-191225600 Enhancers Primary mononuclear cells fromperipheralblood Blood
31 chr2:191225200-191225600 Enhancers Rectal Smooth Muscle rectum
32 chr2:191225200-191225600 Enhancers Dnd41 blood
33 chr2:191225200-191225600 Enhancers NHDF-Ad bronchial
34 chr2:191225200-191225800 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr2:191225200-191226000 Enhancers Primary B cells from peripheral blood blood
36 chr2:191225200-191226000 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr2:191225200-191226000 Active TSS Brain Anterior Caudate brain
38 chr2:191225200-191226000 Enhancers Colon Smooth Muscle Colon
39 chr2:191225200-191226200 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr2:191225200-191226400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:191225200-191226400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:191225200-191226400 Active TSS Brain Hippocampus Middle brain
43 chr2:191225200-191226600 Enhancers Primary T helper naive cells fromperipheralblood blood
44 chr2:191225200-191227200 Enhancers Primary T helper cells fromperipheralblood blood
45 chr2:191225200-191227600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr2:191225200-191227800 Weak transcription Duodenum Mucosa Duodenum
47 chr2:191225200-191228600 Weak transcription Fetal Intestine Large intestine
48 chr2:191225200-191229400 Weak transcription Fetal Muscle Leg muscle
49 chr2:191225200-191229600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr2:191225200-191229600 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015