The 2.0 version of rSNPBase

Variant report

Variant rs2067408
Chromosome Location chr2:191225306-191225307
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191211400-191238000 Weak transcription Hela-S3 cervix
2 chr2:191214000-191230400 Weak transcription Aorta Aorta
3 chr2:191219400-191234000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:191219600-191243800 Weak transcription Gastric stomach
5 chr2:191223800-191236800 Weak transcription Psoas Muscle Psoas
6 chr2:191224000-191235600 Weak transcription Spleen Spleen
7 chr2:191224200-191225400 Active TSS Stomach Smooth Muscle stomach
8 chr2:191224200-191230400 Weak transcription Esophagus oesophagus
9 chr2:191224400-191225400 Active TSS Primary T helper naive cells from peripheral blood blood
10 chr2:191224400-191225400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
11 chr2:191224400-191225400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr2:191224400-191225600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
13 chr2:191224400-191225600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:191224400-191225600 Active TSS Brain Angular Gyrus brain
15 chr2:191224400-191226000 Active TSS Brain Cingulate Gyrus brain
16 chr2:191224400-191227200 Active TSS Brain Inferior Temporal Lobe brain
17 chr2:191224600-191225400 Active TSS Primary T killer memory cells from peripheral blood blood
18 chr2:191224600-191225400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr2:191224600-191226600 Active TSS Brain Substantia Nigra brain
20 chr2:191224800-191225400 Active TSS Primary T killer naive cells fromperipheralblood blood
21 chr2:191224800-191236200 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr2:191225000-191225400 Flanking Active TSS Primary T cells from cord blood blood
23 chr2:191225000-191225400 Active TSS Primary T cells fromperipheralblood blood
24 chr2:191225000-191225400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
25 chr2:191225000-191225400 Active TSS Primary Natural Killer cells fromperipheralblood blood
26 chr2:191225000-191225400 Flanking Active TSS GM12878-XiMat blood
27 chr2:191225000-191225600 Active TSS Duodenum Smooth Muscle Duodenum
28 chr2:191225000-191227800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr2:191225000-191229400 Weak transcription Left Ventricle heart
30 chr2:191225000-191230400 Weak transcription Lung lung
31 chr2:191225000-191232000 Weak transcription Ovary ovary
32 chr2:191225000-191232800 Weak transcription HUVEC blood vessel
33 chr2:191225000-191234200 Weak transcription Right Ventricle heart
34 chr2:191225000-191235600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr2:191225000-191235600 Weak transcription Pancreas Pancrea
36 chr2:191225000-191236400 Strong transcription Primary monocytes fromperipheralblood blood
37 chr2:191225000-191237400 Weak transcription Fetal Brain Female brain
38 chr2:191225000-191237600 Weak transcription Small Intestine intestine
39 chr2:191225000-191242800 Weak transcription Placenta Placenta
40 chr2:191225200-191225400 Enhancers Primary B cells from cord blood blood
41 chr2:191225200-191225400 Enhancers Muscle Satellite Cultured Cells --
42 chr2:191225200-191225400 Enhancers Liver Liver
43 chr2:191225200-191225400 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr2:191225200-191225400 Enhancers Fetal Lung lung
45 chr2:191225200-191225400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
46 chr2:191225200-191225400 Genic enhancers HSMM muscle
47 chr2:191225200-191225600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:191225200-191225600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr2:191225200-191225600 Enhancers Primary mononuclear cells fromperipheralblood Blood
50 chr2:191225200-191225600 Enhancers Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015