The 2.0 version of rSNPBase

Variant report

Variant rs4656
Chromosome Location chr2:191224981-191224982
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191211400-191238000 Weak transcription Hela-S3 cervix
2 chr2:191214000-191230400 Weak transcription Aorta Aorta
3 chr2:191219400-191234000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:191219600-191243800 Weak transcription Gastric stomach
5 chr2:191221400-191225000 Weak transcription Primary monocytes fromperipheralblood blood
6 chr2:191222200-191225200 Enhancers HepG2 liver
7 chr2:191223200-191225000 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr2:191223400-191225200 Enhancers Fetal Heart heart
9 chr2:191223600-191225000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:191223800-191236800 Weak transcription Psoas Muscle Psoas
11 chr2:191224000-191235600 Weak transcription Spleen Spleen
12 chr2:191224200-191225000 Flanking Active TSS Fetal Muscle Leg muscle
13 chr2:191224200-191225000 Active TSS Rectal Mucosa Donor 29 rectum
14 chr2:191224200-191225000 Enhancers HUVEC blood vessel
15 chr2:191224200-191225200 Flanking Active TSS Dnd41 blood
16 chr2:191224200-191225400 Active TSS Stomach Smooth Muscle stomach
17 chr2:191224200-191230400 Weak transcription Esophagus oesophagus
18 chr2:191224400-191225000 Flanking Active TSS Primary T cells fromperipheralblood blood
19 chr2:191224400-191225000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr2:191224400-191225000 Active TSS Brain Anterior Caudate brain
21 chr2:191224400-191225000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
22 chr2:191224400-191225000 Enhancers Placenta Placenta
23 chr2:191224400-191225000 Active TSS HSMMtube muscle
24 chr2:191224400-191225200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr2:191224400-191225200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr2:191224400-191225200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
27 chr2:191224400-191225200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:191224400-191225200 Flanking Active TSS Muscle Satellite Cultured Cells --
29 chr2:191224400-191225200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
30 chr2:191224400-191225200 Flanking Active TSS Fetal Lung lung
31 chr2:191224400-191225200 Flanking Active TSS NHEK skin
32 chr2:191224400-191225200 Flanking Active TSS Osteobl bone
33 chr2:191224400-191225400 Active TSS Primary T helper naive cells from peripheral blood blood
34 chr2:191224400-191225400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
35 chr2:191224400-191225400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr2:191224400-191225600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
37 chr2:191224400-191225600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
38 chr2:191224400-191225600 Active TSS Brain Angular Gyrus brain
39 chr2:191224400-191226000 Active TSS Brain Cingulate Gyrus brain
40 chr2:191224400-191227200 Active TSS Brain Inferior Temporal Lobe brain
41 chr2:191224600-191225000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr2:191224600-191225000 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr2:191224600-191225000 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr2:191224600-191225000 Active TSS Primary T cells from cord blood blood
45 chr2:191224600-191225000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
46 chr2:191224600-191225000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:191224600-191225000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:191224600-191225000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr2:191224600-191225000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:191224600-191225000 Flanking Active TSS Colonic Mucosa Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015