The 2.0 version of rSNPBase

Variant report

Variant rs10173854
Chromosome Location chr2:114656866-114656867
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114648600-114657800 Weak transcription Gastric stomach
2 chr2:114648600-114667600 Weak transcription Lung lung
3 chr2:114649200-114661200 Weak transcription Fetal Muscle Trunk muscle
4 chr2:114649200-114673200 Weak transcription Placenta Placenta
5 chr2:114649600-114661000 Weak transcription Fetal Muscle Leg muscle
6 chr2:114650200-114658400 Enhancers Adipose Nuclei Adipose
7 chr2:114650200-114658400 Enhancers Stomach Mucosa stomach
8 chr2:114650200-114661000 Weak transcription Right Ventricle heart
9 chr2:114651600-114658000 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr2:114652000-114658000 Weak transcription Pancreas Pancrea
11 chr2:114652000-114667600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:114652000-114667600 Weak transcription Esophagus oesophagus
13 chr2:114652200-114658000 Enhancers Duodenum Mucosa Duodenum
14 chr2:114652200-114700600 Weak transcription Fetal Brain Male brain
15 chr2:114652400-114657200 Enhancers HUVEC blood vessel
16 chr2:114652400-114657800 Weak transcription Aorta Aorta
17 chr2:114652400-114657800 Weak transcription Colonic Mucosa Colon
18 chr2:114652400-114660400 Weak transcription Fetal Kidney kidney
19 chr2:114652400-114686000 Weak transcription Placenta Amnion Placenta Amnion
20 chr2:114653000-114658400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:114653000-114659600 Weak transcription Brain Cingulate Gyrus brain
22 chr2:114653200-114658200 Enhancers Liver Liver
23 chr2:114653200-114658400 Enhancers A549 lung
24 chr2:114653200-114659200 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr2:114653200-114662400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr2:114653400-114659000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr2:114653400-114662000 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr2:114653400-114672600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:114653600-114658200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr2:114653600-114734800 Weak transcription H9 Cell Line embryonic stem cell
31 chr2:114653800-114657400 Enhancers Duodenum Smooth Muscle Duodenum
32 chr2:114653800-114658000 Weak transcription Spleen Spleen
33 chr2:114653800-114658400 Enhancers Osteobl bone
34 chr2:114653800-114658600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr2:114653800-114659000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr2:114654000-114657400 Enhancers Skeletal Muscle Male skeletal muscle
37 chr2:114654000-114657600 Enhancers Pancreatic Islets Pancreatic Islet
38 chr2:114654000-114660400 Enhancers Primary B cells from peripheral blood blood
39 chr2:114654000-114670000 Enhancers Primary neutrophils fromperipheralblood blood
40 chr2:114654200-114658000 Enhancers Colon Smooth Muscle Colon
41 chr2:114654200-114659200 Enhancers Monocytes-CD14+_RO01746 blood
42 chr2:114654400-114657800 Weak transcription Brain Angular Gyrus brain
43 chr2:114654400-114667600 Weak transcription Thymus Thymus
44 chr2:114654600-114657400 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr2:114654600-114657400 Enhancers Primary T killer memory cells from peripheral blood blood
46 chr2:114654600-114658400 Weak transcription Right Atrium heart
47 chr2:114654600-114674600 Weak transcription Hela-S3 cervix
48 chr2:114654600-114675400 Weak transcription Fetal Stomach stomach
49 chr2:114654800-114657200 Weak transcription Fetal Lung lung
50 chr2:114654800-114658000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015