The 2.0 version of rSNPBase

Variant report

Variant rs13422866
Chromosome Location chr2:114737555-114737556
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114705200-114737600 Weak transcription Esophagus oesophagus
2 chr2:114715000-114744000 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr2:114718800-114743200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr2:114733400-114741200 Weak transcription Liver Liver
5 chr2:114733400-114743800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr2:114733800-114741600 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr2:114734000-114737800 Weak transcription Muscle Satellite Cultured Cells --
8 chr2:114734000-114738000 Enhancers Pancreas Pancrea
9 chr2:114734000-114746000 Weak transcription Aorta Aorta
10 chr2:114734000-114751800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr2:114734200-114737800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr2:114734400-114749800 Weak transcription Primary T cells fromperipheralblood blood
13 chr2:114734600-114738200 Weak transcription Stomach Smooth Muscle stomach
14 chr2:114734800-114741800 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr2:114734800-114742400 Weak transcription Primary B cells from cord blood blood
16 chr2:114734800-114744000 Weak transcription Primary T cells from cord blood blood
17 chr2:114736000-114737600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
18 chr2:114736000-114737600 Weak transcription Osteobl bone
19 chr2:114736000-114737800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr2:114736000-114738200 Weak transcription NHDF-Ad bronchial
21 chr2:114736000-114742600 Weak transcription NHLF lung
22 chr2:114736200-114737600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:114736200-114738600 Weak transcription HUVEC blood vessel
24 chr2:114736200-114740200 Weak transcription HSMM muscle
25 chr2:114736200-114741200 Weak transcription Gastric stomach
26 chr2:114736200-114761000 Weak transcription HSMMtube muscle
27 chr2:114736400-114737800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:114736400-114737800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr2:114736600-114737800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:114736600-114738800 ZNF genes & repeats H1 Cell Line embryonic stem cell
31 chr2:114736600-114738800 Weak transcription NH-A brain
32 chr2:114736800-114737800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:114736800-114737800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
34 chr2:114736800-114737800 Weak transcription NHEK skin
35 chr2:114736800-114738000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr2:114736800-114738000 ZNF genes & repeats A549 lung
37 chr2:114737000-114737600 ZNF genes & repeats Spleen Spleen
38 chr2:114737000-114738000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:114737000-114738000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
40 chr2:114737000-114738000 ZNF genes & repeats Fetal Intestine Small intestine
41 chr2:114737000-114738000 ZNF genes & repeats Placenta Placenta
42 chr2:114737200-114737600 Enhancers HepG2 liver
43 chr2:114737200-114738000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr2:114737200-114738600 Weak transcription HMEC breast
45 chr2:114737400-114737600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:114737400-114737600 Enhancers Lung lung
47 chr2:114737400-114737800 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
48 chr2:114737400-114738000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr2:114737400-114738000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
50 chr2:114737400-114738000 ZNF genes & repeats GM12878-XiMat blood

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Last update: Aug 31, 2015