Variant report

Variant rs10175838
Chromosome Location chr2:189159443-189159444
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189155200-189161800 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr2:189155400-189160800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:189155400-189161000 Active TSS Aorta Aorta
4 chr2:189155400-189161200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr2:189155400-189161200 Active TSS K562 blood
6 chr2:189155400-189161600 Active TSS HUES6 Cell Line embryonic stem cell
7 chr2:189155600-189161200 Active TSS H9 Cell Line embryonic stem cell
8 chr2:189155600-189161600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
9 chr2:189155600-189161800 Active TSS HUES48 Cell Line embryonic stem cell
10 chr2:189155800-189159800 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr2:189155800-189160000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:189155800-189160200 Active TSS ES-WA7 Cell Line embryonic stem cell
13 chr2:189155800-189160200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
14 chr2:189155800-189160200 Active TSS Fetal Intestine Large intestine
15 chr2:189155800-189161200 Active TSS Placenta Placenta
16 chr2:189155800-189161200 Active TSS A549 lung
17 chr2:189155800-189161400 Active TSS H1 Cell Line embryonic stem cell
18 chr2:189156000-189159600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr2:189156000-189159600 Active TSS Stomach Smooth Muscle stomach
20 chr2:189156000-189159800 Active TSS iPS-15b Cell Line embryonic stem cell
21 chr2:189156000-189160000 Active TSS iPS-20b Cell Line embryonic stem cell
22 chr2:189156000-189160000 Active TSS Brain Angular Gyrus brain
23 chr2:189156000-189161000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
24 chr2:189156000-189161200 Active TSS HUES64 Cell Line embryonic stem cell
25 chr2:189156000-189161600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr2:189156200-189160800 Active TSS iPS-18 Cell Line embryonic stem cell
27 chr2:189156400-189160400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
28 chr2:189157400-189160000 Active TSS Rectal Mucosa Donor 29 rectum
29 chr2:189157800-189159800 Flanking Active TSS NH-A brain
30 chr2:189158000-189159600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:189158000-189163600 Weak transcription Lung lung
32 chr2:189158200-189160200 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr2:189158200-189161400 Flanking Active TSS HUVEC blood vessel
34 chr2:189158400-189160800 Active TSS Cortex derived primary cultured neurospheres brain
35 chr2:189158800-189160000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:189158800-189160000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
37 chr2:189158800-189160200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:189158800-189160400 Flanking Active TSS Fetal Lung lung
39 chr2:189159000-189159800 Active TSS NHLF lung
40 chr2:189159000-189160000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr2:189159000-189160000 Enhancers Fetal Heart heart
42 chr2:189159000-189160400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:189159000-189161600 Active TSS Fetal Brain Female brain
44 chr2:189159000-189163600 Weak transcription Pancreas Pancrea
45 chr2:189159000-189168000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr2:189159000-189168000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:189159200-189159600 Enhancers Adipose Nuclei Adipose
48 chr2:189159200-189159800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr2:189159200-189160000 Enhancers Rectal Smooth Muscle rectum
50 chr2:189159200-189160200 Active TSS Fetal Adrenal Gland Adrenal Gland

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