Variant report

Variant rs13382200
Chromosome Location chr2:189161013-189161014
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189155200-189161800 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr2:189155400-189161200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:189155400-189161200 Active TSS K562 blood
4 chr2:189155400-189161600 Active TSS HUES6 Cell Line embryonic stem cell
5 chr2:189155600-189161200 Active TSS H9 Cell Line embryonic stem cell
6 chr2:189155600-189161600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
7 chr2:189155600-189161800 Active TSS HUES48 Cell Line embryonic stem cell
8 chr2:189155800-189161200 Active TSS Placenta Placenta
9 chr2:189155800-189161200 Active TSS A549 lung
10 chr2:189155800-189161400 Active TSS H1 Cell Line embryonic stem cell
11 chr2:189156000-189161200 Active TSS HUES64 Cell Line embryonic stem cell
12 chr2:189156000-189161600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr2:189158000-189163600 Weak transcription Lung lung
14 chr2:189158200-189161400 Flanking Active TSS HUVEC blood vessel
15 chr2:189159000-189161600 Active TSS Fetal Brain Female brain
16 chr2:189159000-189163600 Weak transcription Pancreas Pancrea
17 chr2:189159000-189168000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr2:189159000-189168000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:189159200-189163400 Weak transcription Stomach Mucosa stomach
20 chr2:189159200-189168000 Weak transcription Psoas Muscle Psoas
21 chr2:189159200-189171200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr2:189160000-189172800 Weak transcription Rectal Smooth Muscle rectum
23 chr2:189160200-189161200 Enhancers Fetal Intestine Small intestine
24 chr2:189160200-189163600 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr2:189160200-189163600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr2:189160200-189167800 Weak transcription Colon Smooth Muscle Colon
27 chr2:189160200-189168200 Weak transcription HMEC breast
28 chr2:189160400-189161200 Enhancers Fetal Intestine Large intestine
29 chr2:189160400-189161200 Enhancers Fetal Lung lung
30 chr2:189160400-189171000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:189160600-189161800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:189160800-189161200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
33 chr2:189160800-189161200 Enhancers Brain Germinal Matrix brain
34 chr2:189160800-189161400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
35 chr2:189160800-189161400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
36 chr2:189160800-189161600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr2:189160800-189161600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
38 chr2:189160800-189161800 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr2:189161000-189161200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr2:189161000-189161200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:189161000-189161200 Flanking Active TSS Aorta Aorta
42 chr2:189161000-189161200 Enhancers Brain Anterior Caudate brain
43 chr2:189161000-189161200 Enhancers Brain Hippocampus Middle brain
44 chr2:189161000-189161200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
45 chr2:189161000-189161200 Enhancers Brain Substantia Nigra brain
46 chr2:189161000-189161200 Enhancers Duodenum Smooth Muscle Duodenum
47 chr2:189161000-189161200 Enhancers Fetal Kidney kidney
48 chr2:189161000-189161400 Enhancers Cortex derived primary cultured neurospheres brain
49 chr2:189161000-189161400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
50 chr2:189161000-189167400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links