Variant report

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10165596	0.89[EUR][1000 genomes]
rs10172501	0.86[EUR][1000 genomes]
rs10174301	0.89[EUR][1000 genomes]
rs10187190	0.81[EUR][1000 genomes]
rs10194277	0.89[EUR][1000 genomes]
rs10194285	0.89[EUR][1000 genomes]
rs10206254	0.89[EUR][1000 genomes]
rs10211213	0.88[EUR][1000 genomes]
rs1038197	0.80[AFR][1000 genomes]
rs12693387	0.95[EUR][1000 genomes]
rs12693395	0.88[EUR][1000 genomes]
rs12693398	0.81[EUR][1000 genomes]
rs13017390	0.89[EUR][1000 genomes]
rs1317210	0.89[EUR][1000 genomes]
rs13384546	0.89[EUR][1000 genomes]
rs13386789	0.89[EUR][1000 genomes]
rs13396624	0.81[EUR][1000 genomes]
rs13398732	0.82[EUR][1000 genomes]
rs13422256	0.81[EUR][1000 genomes]
rs1383307	0.89[EUR][1000 genomes]
rs17431132	0.89[EUR][1000 genomes]
rs17508877	0.95[EUR][1000 genomes]
rs2127698	0.95[EUR][1000 genomes]
rs2199882	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34713272	0.94[EUR][1000 genomes]
rs35328100	0.88[EUR][1000 genomes]
rs4294964	0.88[EUR][1000 genomes]
rs4544394	0.88[EUR][1000 genomes]
rs4586602	0.83[EUR][1000 genomes]
rs62174663	0.88[EUR][1000 genomes]
rs6712125	0.89[EUR][1000 genomes]
rs6725125	0.89[EUR][1000 genomes]
rs6732176	0.89[EUR][1000 genomes]
rs6751335	0.88[EUR][1000 genomes]
rs6755921	0.95[EUR][1000 genomes]
rs73978096	0.89[EUR][1000 genomes]
rs7568843	0.89[EUR][1000 genomes]
rs7588753	0.80[AFR][1000 genomes]
rs9973668	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532412	chr2:185347334-186108701	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv834484	chr2:185550006-185762728	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:185545200-185557000	Weak transcription	Fetal Stomach	stomach

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