The 2.0 version of rSNPBase

Variant report

Variant rs10199154
Chromosome Location chr2:54137826-54137827
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54087000-54168000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr2:54087200-54176000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr2:54087600-54187600 Weak transcription Stomach Mucosa stomach
4 chr2:54088600-54138000 Strong transcription Primary B cells from peripheral blood blood
5 chr2:54090200-54138200 Strong transcription HUES64 Cell Line embryonic stem cell
6 chr2:54091000-54138000 Strong transcription HUES48 Cell Line embryonic stem cell
7 chr2:54091200-54138000 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr2:54100400-54140200 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:54100600-54141200 Strong transcription Primary monocytes fromperipheralblood blood
10 chr2:54100800-54138000 Strong transcription Fetal Muscle Trunk muscle
11 chr2:54106000-54138000 Strong transcription Dnd41 blood
12 chr2:54106200-54138400 Strong transcription Adipose Nuclei Adipose
13 chr2:54108200-54177400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:54109800-54179800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr2:54113200-54144600 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr2:54122200-54172800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr2:54124400-54159200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr2:54124800-54140800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr2:54124800-54141000 Strong transcription Osteobl bone
20 chr2:54125200-54138000 Strong transcription HepG2 liver
21 chr2:54126200-54167600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:54126800-54141000 Strong transcription NHDF-Ad bronchial
23 chr2:54127000-54156000 Weak transcription Pancreas Pancrea
24 chr2:54128000-54145400 Weak transcription Ovary ovary
25 chr2:54128800-54144600 Weak transcription Fetal Brain Male brain
26 chr2:54129000-54157600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:54130400-54138200 Strong transcription GM12878-XiMat blood
28 chr2:54130400-54146600 Weak transcription Small Intestine intestine
29 chr2:54132400-54141200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:54133000-54139200 Weak transcription Gastric stomach
31 chr2:54133000-54139600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:54133000-54142200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr2:54133000-54142200 Weak transcription Fetal Stomach stomach
34 chr2:54133000-54145400 Weak transcription Brain Germinal Matrix brain
35 chr2:54133000-54151800 Weak transcription Psoas Muscle Psoas
36 chr2:54133000-54153000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr2:54133000-54157800 Weak transcription Colonic Mucosa Colon
38 chr2:54133200-54154800 Weak transcription Aorta Aorta
39 chr2:54133400-54145600 Weak transcription Esophagus oesophagus
40 chr2:54133400-54150800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:54133400-54151800 Weak transcription Lung lung
42 chr2:54133400-54154800 Weak transcription Spleen Spleen
43 chr2:54133600-54151800 Weak transcription Placenta Amnion Placenta Amnion
44 chr2:54133600-54152000 Weak transcription Right Ventricle heart
45 chr2:54133800-54145400 Weak transcription Thymus Thymus
46 chr2:54135000-54139200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:54135000-54142200 Weak transcription Fetal Muscle Leg muscle
48 chr2:54135000-54144600 Weak transcription Brain Substantia Nigra brain
49 chr2:54135000-54148000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr2:54135000-54149400 Weak transcription NHLF lung

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Last update: Aug 31, 2015