Variant report
| Variant | rs1020005 |
|---|---|
| Chromosome Location | chr7:12255668-12255669 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:12252000-12256000 | Weak transcription | Lung | lung |
| 2 | chr7:12252000-12256200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 3 | chr7:12252000-12256200 | Weak transcription | Ovary | ovary |
| 4 | chr7:12252000-12256200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr7:12252000-12256400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 6 | chr7:12252000-12261200 | Weak transcription | Aorta | Aorta |
| 7 | chr7:12252000-12261200 | Weak transcription | Esophagus | oesophagus |
| 8 | chr7:12252000-12261200 | Weak transcription | Stomach Mucosa | stomach |
| 9 | chr7:12252000-12263600 | Weak transcription | Thymus | Thymus |
| 10 | chr7:12252000-12266200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 11 | chr7:12252000-12271000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr7:12252000-12271600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 13 | chr7:12252000-12277600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr7:12252000-12278200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr7:12252000-12280000 | Weak transcription | Colonic Mucosa | Colon |
| 16 | chr7:12252000-12280000 | Weak transcription | Right Ventricle | heart |
| 17 | chr7:12252000-12285400 | Weak transcription | Spleen | Spleen |
| 18 | chr7:12252200-12258400 | Weak transcription | HSMM | muscle |
| 19 | chr7:12252200-12259600 | Weak transcription | HMEC | breast |
| 20 | chr7:12252200-12262200 | Weak transcription | GM12878-XiMat | blood |
| 21 | chr7:12252200-12263600 | Weak transcription | NH-A | brain |
| 22 | chr7:12252200-12263800 | Weak transcription | Osteobl | bone |
| 23 | chr7:12252200-12279200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 24 | chr7:12252200-12279400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 25 | chr7:12252400-12256000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 26 | chr7:12252400-12256000 | Weak transcription | Psoas Muscle | Psoas |
| 27 | chr7:12252400-12256400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr7:12252400-12256800 | Weak transcription | Fetal Brain Female | brain |
| 29 | chr7:12252400-12258400 | Weak transcription | Brain Anterior Caudate | brain |
| 30 | chr7:12252400-12258400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 31 | chr7:12252400-12258400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 32 | chr7:12252400-12259000 | Weak transcription | Brain Germinal Matrix | brain |
| 33 | chr7:12252400-12259200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 34 | chr7:12252400-12261200 | Weak transcription | Pancreas | Pancrea |
| 35 | chr7:12252400-12262200 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 36 | chr7:12252400-12263200 | Weak transcription | Left Ventricle | heart |
| 37 | chr7:12252400-12263400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 38 | chr7:12252400-12265800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr7:12252400-12266000 | Weak transcription | Small Intestine | intestine |
| 40 | chr7:12252400-12269400 | Weak transcription | HUVEC | blood vessel |
| 41 | chr7:12252400-12271200 | Weak transcription | K562 | blood |
| 42 | chr7:12252400-12271400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 43 | chr7:12252400-12272600 | Weak transcription | Gastric | stomach |
| 44 | chr7:12252400-12277200 | Weak transcription | Fetal Brain Male | brain |
| 45 | chr7:12252400-12278600 | Weak transcription | NHEK | skin |
| 46 | chr7:12252400-12281600 | Weak transcription | HSMMtube | muscle |
| 47 | chr7:12252400-12284000 | Weak transcription | Fetal Intestine Small | intestine |
| 48 | chr7:12252600-12256400 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 49 | chr7:12252600-12258200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 50 | chr7:12252600-12258200 | Weak transcription | Duodenum Mucosa | Duodenum |
