Variant report

Variant rs6460895
Chromosome Location chr7:12252540-12252541
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:12249800-12253000 Active TSS Pancreatic Islets Pancreatic Islet
2 chr7:12250600-12252800 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr7:12251000-12252600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
4 chr7:12251600-12252600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
5 chr7:12251600-12252600 Flanking Active TSS Primary T cells from cord blood blood
6 chr7:12251600-12252600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
7 chr7:12251800-12252600 Flanking Active TSS Brain Cingulate Gyrus brain
8 chr7:12252000-12252600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr7:12252000-12252600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr7:12252000-12252600 Enhancers Fetal Heart heart
11 chr7:12252000-12252600 Enhancers NHDF-Ad bronchial
12 chr7:12252000-12252800 Active TSS iPS-18 Cell Line embryonic stem cell
13 chr7:12252000-12252800 Enhancers Primary B cells from cord blood blood
14 chr7:12252000-12252800 Enhancers Muscle Satellite Cultured Cells --
15 chr7:12252000-12252800 Enhancers Brain Substantia Nigra brain
16 chr7:12252000-12253400 Weak transcription Brain Hippocampus Middle brain
17 chr7:12252000-12254200 Enhancers Primary T regulatory cells fromperipheralblood blood
18 chr7:12252000-12254400 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr7:12252000-12254400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr7:12252000-12254400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr7:12252000-12254400 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr7:12252000-12254400 Weak transcription Fetal Muscle Trunk muscle
23 chr7:12252000-12254800 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr7:12252000-12255400 Weak transcription Primary monocytes fromperipheralblood blood
25 chr7:12252000-12255400 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr7:12252000-12256000 Weak transcription Lung lung
27 chr7:12252000-12256200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr7:12252000-12256200 Weak transcription Ovary ovary
29 chr7:12252000-12256200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr7:12252000-12256400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr7:12252000-12261200 Weak transcription Aorta Aorta
32 chr7:12252000-12261200 Weak transcription Esophagus oesophagus
33 chr7:12252000-12261200 Weak transcription Stomach Mucosa stomach
34 chr7:12252000-12263600 Weak transcription Thymus Thymus
35 chr7:12252000-12266200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr7:12252000-12271000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr7:12252000-12271600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr7:12252000-12277600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr7:12252000-12278200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr7:12252000-12280000 Weak transcription Colonic Mucosa Colon
41 chr7:12252000-12280000 Weak transcription Right Ventricle heart
42 chr7:12252000-12285400 Weak transcription Spleen Spleen
43 chr7:12252200-12252600 Active TSS HUES6 Cell Line embryonic stem cell
44 chr7:12252200-12252600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr7:12252200-12252600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr7:12252200-12252600 Enhancers Duodenum Mucosa Duodenum
47 chr7:12252200-12252600 Enhancers NHLF lung
48 chr7:12252200-12252800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr7:12252200-12253000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr7:12252200-12253000 Enhancers Duodenum Smooth Muscle Duodenum

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