The 2.0 version of rSNPBase

Variant report

Variant rs10203576
Chromosome Location chr2:54288076-54288077
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54248600-54289800 Weak transcription Fetal Lung lung
2 chr2:54268400-54290800 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:54273000-54292400 Weak transcription Fetal Brain Female brain
4 chr2:54277200-54290800 Weak transcription Stomach Smooth Muscle stomach
5 chr2:54278800-54302400 Weak transcription Left Ventricle heart
6 chr2:54280000-54292400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:54280800-54291400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr2:54280800-54310000 Weak transcription Ovary ovary
9 chr2:54280800-54315000 Weak transcription Adipose Nuclei Adipose
10 chr2:54280800-54315200 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr2:54280800-54331000 Weak transcription Aorta Aorta
12 chr2:54281000-54291200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr2:54281200-54292400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr2:54281600-54289400 Weak transcription Primary B cells from cord blood blood
15 chr2:54281600-54308800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr2:54282000-54288400 Weak transcription Primary B cells from peripheral blood blood
17 chr2:54282000-54291200 Weak transcription Brain Hippocampus Middle brain
18 chr2:54282200-54293800 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr2:54283000-54290000 Weak transcription Brain Anterior Caudate brain
20 chr2:54283400-54291200 Weak transcription Pancreas Pancrea
21 chr2:54283400-54292400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr2:54283600-54290600 Weak transcription Stomach Mucosa stomach
23 chr2:54285000-54291000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:54286600-54288200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:54287000-54310000 Weak transcription Primary hematopoietic stem cells blood
26 chr2:54287200-54290600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr2:54287200-54291200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:54287200-54291800 Weak transcription HSMMtube muscle
29 chr2:54287200-54293200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr2:54287200-54307000 Weak transcription Primary T cells from cord blood blood
31 chr2:54287400-54290800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr2:54287400-54295000 Weak transcription K562 blood
33 chr2:54287600-54290600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:54287600-54291400 Weak transcription HSMM muscle
35 chr2:54287600-54292600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:54287800-54292400 Weak transcription NH-A brain
37 chr2:54288000-54290600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:54288000-54290600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:54288000-54290600 Weak transcription HMEC breast
40 chr2:54288000-54290800 Weak transcription NHEK skin
41 chr2:54288000-54291400 Weak transcription Fetal Muscle Leg muscle
42 chr2:54288000-54291800 Weak transcription Osteobl bone
43 chr2:54288000-54292200 Weak transcription Muscle Satellite Cultured Cells --
44 chr2:54288000-54292200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015