Variant report

Variant rs918357
Chromosome Location chr2:54335963-54335964
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54291200-54342000 Weak transcription Stomach Smooth Muscle stomach
2 chr2:54331200-54342000 Weak transcription Psoas Muscle Psoas
3 chr2:54331200-54342400 Weak transcription Pancreas Pancrea
4 chr2:54331400-54342200 Weak transcription Aorta Aorta
5 chr2:54333800-54341800 Weak transcription K562 blood
6 chr2:54334200-54336000 Enhancers Fetal Brain Male brain
7 chr2:54334600-54336000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr2:54334600-54336000 Enhancers Brain Inferior Temporal Lobe brain
9 chr2:54334800-54336000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:54334800-54341600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr2:54334800-54341800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr2:54334800-54342000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr2:54335000-54336000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:54335000-54336000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr2:54335000-54336000 Enhancers Liver Liver
16 chr2:54335000-54336000 Enhancers NHEK skin
17 chr2:54335200-54336000 Enhancers HMEC breast
18 chr2:54335200-54341200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:54335400-54336000 Enhancers Primary B cells from peripheral blood blood
20 chr2:54335600-54336000 Enhancers Brain Angular Gyrus brain
21 chr2:54335600-54336000 Enhancers Brain Anterior Caudate brain
22 chr2:54335600-54336000 Enhancers Brain Cingulate Gyrus brain
23 chr2:54335600-54336000 Enhancers Brain Hippocampus Middle brain
24 chr2:54335600-54341800 Weak transcription Fetal Heart heart
25 chr2:54335800-54336000 Enhancers ES-WA7 Cell Line embryonic stem cell
26 chr2:54335800-54336000 Enhancers HUES6 Cell Line embryonic stem cell
27 chr2:54335800-54336000 Enhancers Primary B cells from cord blood blood
28 chr2:54335800-54336000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr2:54335800-54336800 Weak transcription HepG2 liver
30 chr2:54335800-54341200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr2:54335800-54341200 Weak transcription Brain Substantia Nigra brain
32 chr2:54335800-54341800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr2:54335800-54341800 Weak transcription HSMM muscle
34 chr2:54335800-54341800 Weak transcription HSMMtube muscle
35 chr2:54335800-54342000 Weak transcription Fetal Muscle Leg muscle

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