The 2.0 version of rSNPBase

Variant report

Variant rs10205459
Chromosome Location chr2:172180771-172180772
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172163800-172181400 Weak transcription Gastric stomach
2 chr2:172169200-172182400 Weak transcription Aorta Aorta
3 chr2:172169200-172193400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:172169800-172181200 Weak transcription Muscle Satellite Cultured Cells --
5 chr2:172169800-172183200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr2:172170200-172192800 Weak transcription Fetal Intestine Large intestine
7 chr2:172171400-172190800 Weak transcription Esophagus oesophagus
8 chr2:172171800-172211600 Weak transcription Fetal Intestine Small intestine
9 chr2:172172600-172190600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr2:172172800-172190600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr2:172172800-172222400 Weak transcription Fetal Muscle Trunk muscle
12 chr2:172173000-172182200 Weak transcription Liver Liver
13 chr2:172173600-172186000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:172175200-172181800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr2:172175400-172183000 Weak transcription Fetal Lung lung
16 chr2:172175400-172187600 Weak transcription Fetal Muscle Leg muscle
17 chr2:172175600-172188000 Weak transcription Adipose Nuclei Adipose
18 chr2:172175800-172183600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr2:172176000-172183400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:172176000-172184400 Weak transcription NHDF-Ad bronchial
21 chr2:172176000-172187800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr2:172176200-172181200 Weak transcription Primary T cells fromperipheralblood blood
23 chr2:172176200-172181800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr2:172176200-172182400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr2:172176200-172183200 Weak transcription Fetal Stomach stomach
26 chr2:172176200-172183600 Weak transcription Stomach Smooth Muscle stomach
27 chr2:172176200-172183800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:172176200-172198600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:172176400-172183000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr2:172176400-172183400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:172176600-172182000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr2:172176800-172181200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr2:172177000-172182000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr2:172177000-172183400 Weak transcription Brain Hippocampus Middle brain
35 chr2:172177200-172183200 Weak transcription Rectal Smooth Muscle rectum
36 chr2:172177400-172181200 Weak transcription Brain Cingulate Gyrus brain
37 chr2:172177400-172182200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:172177400-172183000 Weak transcription ES-WA7 Cell Line embryonic stem cell
39 chr2:172177400-172183600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr2:172177600-172181000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr2:172177600-172184400 Weak transcription H9 Cell Line embryonic stem cell
42 chr2:172177800-172180800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr2:172177800-172182800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr2:172177800-172183400 Weak transcription Colon Smooth Muscle Colon
45 chr2:172178000-172181800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr2:172178000-172182000 Strong transcription Dnd41 blood
47 chr2:172178000-172183600 Weak transcription Fetal Brain Male brain
48 chr2:172178000-172190600 Weak transcription Left Ventricle heart
49 chr2:172178400-172182800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:172178400-172183800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015