The 2.0 version of rSNPBase

Variant report

Variant rs10209589
Chromosome Location chr2:231369683-231369684
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231336800-231376000 Weak transcription Colonic Mucosa Colon
2 chr2:231338400-231376200 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:231346600-231370000 Weak transcription K562 blood
4 chr2:231352600-231376800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr2:231355200-231380400 Strong transcription Adipose Nuclei Adipose
6 chr2:231355600-231378600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:231355800-231381400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr2:231356400-231377000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:231357200-231377800 Weak transcription Stomach Mucosa stomach
10 chr2:231358400-231369800 Strong transcription HUVEC blood vessel
11 chr2:231358400-231376600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:231358600-231377400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr2:231359600-231380400 Weak transcription Brain Hippocampus Middle brain
14 chr2:231361800-231374200 Strong transcription Primary monocytes fromperipheralblood blood
15 chr2:231361800-231381400 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr2:231362000-231376600 Strong transcription Primary T helper cells PMA-I stimulated --
17 chr2:231362000-231376600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr2:231362200-231374800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr2:231362200-231378600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:231362400-231378400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr2:231362400-231378600 Strong transcription Primary T cells from cord blood blood
22 chr2:231362600-231378600 Strong transcription Primary T cells fromperipheralblood blood
23 chr2:231362600-231380600 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr2:231362800-231376600 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr2:231363000-231376600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr2:231363200-231370200 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr2:231363200-231372000 Strong transcription Muscle Satellite Cultured Cells --
28 chr2:231363400-231372600 Strong transcription Lung lung
29 chr2:231363400-231372800 Strong transcription Rectal Mucosa Donor 29 rectum
30 chr2:231363400-231377000 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr2:231363800-231380200 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr2:231364200-231381000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr2:231364600-231371000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:231364600-231385800 Weak transcription HSMMtube muscle
35 chr2:231364800-231373600 Weak transcription Esophagus oesophagus
36 chr2:231364800-231377200 Weak transcription Fetal Intestine Large intestine
37 chr2:231365200-231370600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:231365200-231370600 Weak transcription Placenta Placenta
39 chr2:231365400-231374600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr2:231365400-231377600 Weak transcription Fetal Intestine Small intestine
41 chr2:231365600-231370000 Weak transcription Pancreas Pancrea
42 chr2:231365600-231373400 Weak transcription Colon Smooth Muscle Colon
43 chr2:231365600-231374400 Weak transcription NHEK skin
44 chr2:231365600-231376000 Weak transcription Fetal Stomach stomach
45 chr2:231365600-231377200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr2:231366200-231371400 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr2:231366200-231372600 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr2:231366400-231370000 Strong transcription Primary hematopoietic stem cells blood
49 chr2:231366600-231369800 Weak transcription NH-A brain
50 chr2:231366600-231374000 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015