Variant report

Variant	rs1022074
Chromosome Location	chr4:147779099-147779100
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs13104820	0.90[CEU][hapmap];0.89[EUR][1000 genomes]
rs13143615	0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13147082	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17022020	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2089622	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2136366	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34431124	0.90[EUR][1000 genomes]
rs34470581	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34824736	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs58195224	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs67138779	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6824183	0.88[CHB][hapmap];0.82[JPT][hapmap]
rs984695	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880239	chr4:147666797-147779999	Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147766400-147779400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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