Variant report

Variant	rs13104820
Chromosome Location	chr4:147864614-147864615
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs1022074	0.89[EUR][1000 genomes]
rs10519848	0.90[MEX][hapmap];0.81[AMR][1000 genomes]
rs13120245	0.95[MEX][hapmap];0.90[TSI][hapmap];0.87[EUR][1000 genomes]
rs1437265	0.87[EUR][1000 genomes]
rs1437266	0.87[EUR][1000 genomes]
rs17022020	0.81[EUR][1000 genomes]
rs17472966	0.85[YRI][hapmap]
rs1816596	1.00[ASW][hapmap];0.83[CHD][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2004172	0.87[EUR][1000 genomes]
rs2136366	0.81[EUR][1000 genomes]
rs2884189	0.87[EUR][1000 genomes]
rs34431124	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34470581	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34764961	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs34782747	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35168292	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs35712144	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3810844	0.81[AFR][1000 genomes]
rs3827595	0.81[CEU][hapmap];0.95[MEX][hapmap];0.90[TSI][hapmap];0.87[EUR][1000 genomes]
rs56317226	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62328057	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs62329360	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62329362	0.86[EUR][1000 genomes]
rs62329364	0.87[EUR][1000 genomes]
rs714627	0.81[CEU][hapmap];0.87[EUR][1000 genomes]
rs748828	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7658558	0.87[EUR][1000 genomes]
rs7660168	0.88[LWK][hapmap]
rs7664149	0.81[CEU][hapmap];0.95[MEX][hapmap];0.90[TSI][hapmap];0.87[EUR][1000 genomes]
rs7678787	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7680139	0.87[EUR][1000 genomes]
rs882188	0.86[EUR][1000 genomes]
rs893231	0.87[EUR][1000 genomes]
rs969511	0.87[EUR][1000 genomes]
rs984695	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs984696	0.81[AFR][1000 genomes]
rs993759	0.81[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147863800-147865200	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr4:147863800-147865800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr4:147864000-147866200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr4:147864200-147865000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr4:147864200-147865600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr4:147864200-147866600	Weak transcription	Brain Germinal Matrix	brain
7	chr4:147864200-147866600	Weak transcription	Fetal Thymus	thymus
8	chr4:147864200-147866600	Weak transcription	Thymus	Thymus
9	chr4:147864400-147865600	Enhancers	H1 Cell Line	embryonic stem cell
10	chr4:147864400-147865600	Enhancers	HUES6 Cell Line	embryonic stem cell

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