Variant report

Variant	rs62329360
Chromosome Location	chr4:147868618-147868619
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10519848	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13104820	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13118835	0.80[EUR][1000 genomes]
rs13120245	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1437265	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1437266	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17472952	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17472966	0.86[AMR][1000 genomes]
rs17576594	0.80[EUR][1000 genomes]
rs1816596	0.84[AFR][1000 genomes]
rs2004172	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2357439	0.86[AMR][1000 genomes]
rs2884189	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34221140	0.85[AMR][1000 genomes]
rs34431124	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34470581	0.83[EUR][1000 genomes]
rs34764961	0.81[AMR][1000 genomes]
rs34782747	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35168292	0.81[AMR][1000 genomes]
rs35334988	0.86[AMR][1000 genomes]
rs35712144	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3827595	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55974445	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56199987	0.82[AMR][1000 genomes]
rs56317226	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62328057	0.81[AMR][1000 genomes]
rs62329362	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62329364	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6855963	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs714627	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs748828	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7658558	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7660168	0.86[AMR][1000 genomes]
rs7664149	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7668995	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7678787	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7680139	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7699439	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs882188	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs893231	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs969511	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs984695	0.83[EUR][1000 genomes]
rs993759	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147867600-147869000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr4:147867600-147880600	Weak transcription	Pancreas	Pancrea
3	chr4:147867800-147869000	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr4:147867800-147869000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr4:147867800-147869600	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr4:147867800-147869600	Enhancers	Primary T killer memory cells from peripheral blood	blood
7	chr4:147868000-147868800	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr4:147868000-147869000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr4:147868000-147869000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr4:147868200-147868800	Bivalent Enhancer	Primary B cells from cord blood	blood
11	chr4:147868200-147869000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr4:147868200-147869200	Weak transcription	Thymus	Thymus
13	chr4:147868200-147872600	Weak transcription	Psoas Muscle	Psoas
14	chr4:147868400-147868800	Enhancers	Primary T cells from cord blood	blood
15	chr4:147868400-147869200	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr4:147868600-147868800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
17	chr4:147868600-147869400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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