Variant report
| Variant | rs34470581 |
|---|---|
| Chromosome Location | chr4:147818465-147818466 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:39)
| rs_ID | r2[population] |
|---|---|
| rs1022074 | 0.87[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs13104820 | 0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs13120245 | 0.82[EUR][1000 genomes] |
| rs13138511 | 0.85[AFR][1000 genomes] |
| rs13143615 | 0.84[AMR][1000 genomes] |
| rs1437265 | 0.82[EUR][1000 genomes] |
| rs1437266 | 0.82[EUR][1000 genomes] |
| rs17022020 | 0.82[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs1816596 | 0.82[AFR][1000 genomes] |
| rs2004172 | 0.82[EUR][1000 genomes] |
| rs2089622 | 0.85[AMR][1000 genomes] |
| rs2136366 | 0.82[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs2884189 | 0.82[EUR][1000 genomes] |
| rs34431124 | 0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs34764961 | 0.88[AFR][1000 genomes] |
| rs34782747 | 0.82[EUR][1000 genomes] |
| rs34824736 | 0.80[AMR][1000 genomes] |
| rs35168292 | 0.83[AFR][1000 genomes] |
| rs35712144 | 0.83[EUR][1000 genomes] |
| rs3810844 | 0.95[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs3827595 | 0.82[EUR][1000 genomes] |
| rs56317226 | 0.82[EUR][1000 genomes] |
| rs62328057 | 0.88[AFR][1000 genomes] |
| rs62329360 | 0.83[EUR][1000 genomes] |
| rs62329362 | 0.81[EUR][1000 genomes] |
| rs62329364 | 0.82[EUR][1000 genomes] |
| rs67138779 | 0.85[AMR][1000 genomes] |
| rs714627 | 0.82[EUR][1000 genomes] |
| rs748828 | 0.82[EUR][1000 genomes] |
| rs7658558 | 0.82[EUR][1000 genomes] |
| rs7664149 | 0.82[EUR][1000 genomes] |
| rs7678787 | 0.82[EUR][1000 genomes] |
| rs7680139 | 0.82[EUR][1000 genomes] |
| rs882188 | 0.81[EUR][1000 genomes] |
| rs893231 | 0.82[EUR][1000 genomes] |
| rs969511 | 0.82[EUR][1000 genomes] |
| rs984695 | 0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs984696 | 0.95[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs993759 | 0.82[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:147817800-147820800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
