Variant report

Variant	rs1816596
Chromosome Location	chr4:147865105-147865106
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs13104820	1.00[ASW][hapmap];0.83[CHD][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13138511	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17472966	0.85[YRI][hapmap]
rs34431124	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs34470581	0.82[AFR][1000 genomes]
rs34764961	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35168292	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35712144	0.84[AFR][1000 genomes]
rs3810844	0.84[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs62328057	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62329360	0.84[AFR][1000 genomes]
rs984696	0.84[AFR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147863800-147865200	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr4:147863800-147865800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr4:147864000-147866200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr4:147864200-147865600	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr4:147864200-147866600	Weak transcription	Brain Germinal Matrix	brain
6	chr4:147864200-147866600	Weak transcription	Fetal Thymus	thymus
7	chr4:147864200-147866600	Weak transcription	Thymus	Thymus
8	chr4:147864400-147865600	Enhancers	H1 Cell Line	embryonic stem cell
9	chr4:147864400-147865600	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr4:147864800-147865800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr4:147865000-147865200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr4:147865000-147866000	Enhancers	ES-WA7 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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