Variant report

Variant	rs7699439
Chromosome Location	chr4:147901511-147901512
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10519848	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13104820	0.88[LWK][hapmap];0.86[MEX][hapmap]
rs13118835	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13120245	0.90[CEU][hapmap];0.81[MEX][hapmap];0.81[TSI][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13150187	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13151041	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1437265	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1437266	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17472952	0.83[CHB][hapmap];0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17472966	0.84[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17576594	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1992118	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1992119	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2004172	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2357439	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2884189	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34221140	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34344397	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34782747	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35334988	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35712144	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3789147	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3827595	0.91[CEU][hapmap];0.81[MEX][hapmap];0.81[TSI][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55974445	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56199987	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56317226	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62329360	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62329362	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62329364	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6828944	0.80[ASN][1000 genomes]
rs6855963	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs714627	0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs748828	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7658558	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7660168	0.87[ASW][hapmap];1.00[CHB][hapmap];0.95[GIH][hapmap];0.89[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7664149	0.91[CEU][hapmap];0.81[MEX][hapmap];0.81[TSI][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7668995	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7678787	0.90[CEU][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7680139	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs867	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs882188	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs893231	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs969511	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs993759	0.91[CEU][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147897800-147902600	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr4:147897800-147902800	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr4:147898200-147905800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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