Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10519848	0.89[EUR][1000 genomes]
rs13118835	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13150187	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13151041	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17472952	0.81[EUR][1000 genomes]
rs17472966	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17576594	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1992118	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1992119	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2118257	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2357439	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34221140	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35334988	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3789147	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55974445	0.88[EUR][1000 genomes]
rs56199987	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6855963	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7660168	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7668995	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7699439	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs867	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880240	chr4:147905897-148032003	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1016598	chr4:147931134-148012064	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147962600-147964000	Enhancers	Brain Hippocampus Middle	brain
2	chr4:147963400-147965000	Weak transcription	Stomach Smooth Muscle	stomach

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