Variant report

Variant	rs10234688
Chromosome Location	chr7:67528248-67528249
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10227911	1.00[JPT][hapmap]
rs10238808	1.00[ASN][1000 genomes]
rs10254721	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17145032	1.00[EUR][1000 genomes]
rs17145054	0.84[AFR][1000 genomes]
rs4571622	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59683449	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6946767	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73387275	1.00[ASN][1000 genomes]
rs73387283	1.00[ASN][1000 genomes]
rs73387290	1.00[ASN][1000 genomes]
rs9886289	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv607428	chr7:67526074-67788551	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:67525800-67531400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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