Variant report

Variant	rs10238323
Chromosome Location	chr7:14775769-14775770
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10085625	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10251472	1.00[EUR][1000 genomes]
rs1404622	1.00[EUR][1000 genomes]
rs1614700	1.00[EUR][1000 genomes]
rs1723242	1.00[EUR][1000 genomes]
rs55782903	1.00[EUR][1000 genomes]
rs55809480	1.00[EUR][1000 genomes]
rs55954033	1.00[EUR][1000 genomes]
rs56905045	1.00[EUR][1000 genomes]
rs60120032	1.00[EUR][1000 genomes]
rs60544805	1.00[EUR][1000 genomes]
rs61058262	1.00[EUR][1000 genomes]
rs61147906	1.00[EUR][1000 genomes]
rs61272991	1.00[EUR][1000 genomes]
rs6947404	1.00[EUR][1000 genomes]
rs6966072	1.00[EUR][1000 genomes]
rs73276014	1.00[EUR][1000 genomes]
rs73280239	1.00[EUR][1000 genomes]
rs73680178	1.00[EUR][1000 genomes]
rs73680193	1.00[EUR][1000 genomes]
rs73680202	1.00[EUR][1000 genomes]
rs73680304	1.00[EUR][1000 genomes]
rs73680340	1.00[EUR][1000 genomes]
rs73680357	1.00[EUR][1000 genomes]
rs73680371	1.00[EUR][1000 genomes]
rs73680372	1.00[EUR][1000 genomes]
rs73680375	1.00[EUR][1000 genomes]
rs73680376	1.00[EUR][1000 genomes]
rs73680379	1.00[EUR][1000 genomes]
rs73680382	1.00[EUR][1000 genomes]
rs73680431	1.00[EUR][1000 genomes]
rs73680434	1.00[EUR][1000 genomes]
rs73680435	1.00[EUR][1000 genomes]
rs73680447	1.00[EUR][1000 genomes]
rs73680449	1.00[EUR][1000 genomes]
rs73680450	1.00[EUR][1000 genomes]
rs73680451	1.00[EUR][1000 genomes]
rs73680453	1.00[EUR][1000 genomes]
rs73680454	1.00[EUR][1000 genomes]
rs73680455	1.00[EUR][1000 genomes]
rs73680493	1.00[EUR][1000 genomes]
rs73680494	1.00[EUR][1000 genomes]
rs73682503	1.00[EUR][1000 genomes]
rs73682511	1.00[EUR][1000 genomes]
rs73682513	1.00[EUR][1000 genomes]
rs73682548	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1031041	chr7:14624127-14999201	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv538741	chr7:14624127-14999201	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv887712	chr7:14717872-14829858	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14775000-14779600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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