Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:117800817..117802687-chr7:117810955..117814071,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10228816	0.91[EUR][1000 genomes]
rs10258010	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10269710	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12216555	0.82[JPT][hapmap]
rs12540880	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs17141135	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2058415	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3757799	0.82[JPT][hapmap]
rs3757801	0.82[JPT][hapmap]
rs3808178	0.81[JPT][hapmap]
rs4141027	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4141029	0.82[JPT][hapmap]
rs4141030	0.82[JPT][hapmap]
rs4727861	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4730826	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62468162	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62468163	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6943182	0.82[JPT][hapmap]
rs6962486	0.82[JPT][hapmap]
rs6964881	0.81[JPT][hapmap]
rs6976656	0.81[JPT][hapmap]
rs6979426	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7778155	0.82[JPT][hapmap]
rs7779452	0.82[JPT][hapmap]
rs7792264	0.81[JPT][hapmap]
rs7792296	0.81[JPT][hapmap]
rs7796775	0.81[JPT][hapmap]
rs7798529	0.81[JPT][hapmap]
rs979653	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869971	chr7:117420583-118274149	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	nsv889088	chr7:117744660-117913648	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117791200-117815800	Weak transcription	Psoas Muscle	Psoas

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