Variant report

Variant rs3808178
Chromosome Location chr7:117831743-117831744
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:117824800-117832600 Weak transcription Pancreas Pancrea
2 chr7:117825000-117834000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr7:117825000-117842200 Weak transcription Aorta Aorta
4 chr7:117825200-117834000 Weak transcription H9 Cell Line embryonic stem cell
5 chr7:117825600-117832000 Weak transcription Placenta Amnion Placenta Amnion
6 chr7:117825600-117834000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr7:117825600-117835000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr7:117825600-117835600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr7:117825600-117837200 Weak transcription Left Ventricle heart
10 chr7:117825800-117834000 Weak transcription Brain Cingulate Gyrus brain
11 chr7:117825800-117834600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:117825800-117836600 Weak transcription Psoas Muscle Psoas
13 chr7:117825800-117842600 Weak transcription Brain Hippocampus Middle brain
14 chr7:117826000-117832000 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr7:117826000-117833200 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr7:117826000-117833600 Weak transcription HepG2 liver
17 chr7:117826000-117834000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr7:117826000-117834200 Strong transcription iPS-18 Cell Line embryonic stem cell
19 chr7:117826000-117834200 Weak transcription Fetal Brain Male brain
20 chr7:117826000-117835200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr7:117826400-117833200 Strong transcription HUES48 Cell Line embryonic stem cell
22 chr7:117826600-117834000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr7:117826800-117832400 Weak transcription Colon Smooth Muscle Colon
24 chr7:117826800-117833400 Strong transcription iPS-20b Cell Line embryonic stem cell
25 chr7:117827000-117832800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr7:117827000-117833200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr7:117827000-117834000 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr7:117827200-117832600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:117827200-117833400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr7:117827400-117833000 Strong transcription HUES6 Cell Line embryonic stem cell
31 chr7:117827400-117833000 Strong transcription Primary B cells from peripheral blood blood
32 chr7:117827400-117833400 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr7:117827400-117833400 Strong transcription Liver Liver
34 chr7:117827400-117834000 Strong transcription Primary monocytes fromperipheralblood blood
35 chr7:117827400-117834400 Strong transcription Fetal Thymus thymus
36 chr7:117827600-117832600 Strong transcription Duodenum Mucosa Duodenum
37 chr7:117827600-117832800 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr7:117827600-117833800 Strong transcription Primary T cells fromperipheralblood blood
39 chr7:117827600-117834400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr7:117827800-117832800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr7:117827800-117833200 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr7:117827800-117833600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr7:117828000-117832200 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr7:117828000-117832600 Strong transcription Adipose Nuclei Adipose
45 chr7:117828000-117833000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr7:117828000-117833000 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr7:117828000-117833400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr7:117828000-117834000 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr7:117828000-117835600 Weak transcription NHEK skin
50 chr7:117828200-117833200 Strong transcription Primary T helper cells PMA-I stimulated --

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