The 2.0 version of rSNPBase

Variant report

Variant rs16870173
Chromosome Location chr7:117834342-117834343
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:117825000-117842200 Weak transcription Aorta Aorta
2 chr7:117825600-117835000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr7:117825600-117835600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr7:117825600-117837200 Weak transcription Left Ventricle heart
5 chr7:117825800-117834600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr7:117825800-117836600 Weak transcription Psoas Muscle Psoas
7 chr7:117825800-117842600 Weak transcription Brain Hippocampus Middle brain
8 chr7:117826000-117835200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr7:117827400-117834400 Strong transcription Fetal Thymus thymus
10 chr7:117827600-117834400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr7:117828000-117835600 Weak transcription NHEK skin
12 chr7:117828400-117834400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr7:117828400-117835800 Weak transcription Brain Substantia Nigra brain
14 chr7:117828400-117836000 Weak transcription Fetal Kidney kidney
15 chr7:117828800-117835400 Weak transcription Primary hematopoietic stem cells blood
16 chr7:117828800-117838800 Weak transcription Primary B cells from cord blood blood
17 chr7:117829200-117835400 Weak transcription Colonic Mucosa Colon
18 chr7:117829800-117835600 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr7:117829800-117840800 Weak transcription Primary T cells from cord blood blood
20 chr7:117830400-117835200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr7:117830400-117842400 Weak transcription Fetal Lung lung
22 chr7:117830600-117834600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr7:117830600-117834800 Weak transcription NHLF lung
24 chr7:117830600-117835600 Weak transcription A549 lung
25 chr7:117830800-117834800 Weak transcription Fetal Intestine Large intestine
26 chr7:117831000-117835000 Strong transcription Dnd41 blood
27 chr7:117831000-117835400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr7:117831200-117835200 Weak transcription Fetal Muscle Trunk muscle
29 chr7:117831200-117835600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr7:117831200-117836000 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr7:117831200-117842400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr7:117831400-117839800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr7:117832000-117835400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr7:117832200-117835400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr7:117832200-117836400 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr7:117832600-117834400 Weak transcription NHDF-Ad bronchial
37 chr7:117832600-117834400 Weak transcription Osteobl bone
38 chr7:117832600-117835600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr7:117832600-117836200 Weak transcription Adipose Nuclei Adipose
40 chr7:117832600-117836400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr7:117832800-117834600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr7:117832800-117835000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr7:117832800-117842200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr7:117833000-117834600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr7:117833000-117834800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr7:117833000-117834800 Weak transcription Primary B cells from peripheral blood blood
47 chr7:117833000-117835000 Weak transcription HMEC breast
48 chr7:117833000-117837200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr7:117833000-117854000 Weak transcription HSMM muscle
50 chr7:117833200-117834800 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015