Variant report

Variant	rs10272363
Chromosome Location	chr7:121641475-121641476
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10230001	1.00[EUR][1000 genomes]
rs10247948	1.00[EUR][1000 genomes]
rs10275500	0.94[EUR][1000 genomes]
rs1196479	0.83[EUR][1000 genomes]
rs1196489	0.83[EUR][1000 genomes]
rs1206518	0.83[EUR][1000 genomes]
rs1206519	0.83[EUR][1000 genomes]
rs17524836	0.93[EUR][1000 genomes]
rs28446411	0.93[EUR][1000 genomes]
rs28493707	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28582021	1.00[EUR][1000 genomes]
rs41281698	0.93[EUR][1000 genomes]
rs60700889	0.83[EUR][1000 genomes]
rs73214119	0.80[EUR][1000 genomes]
rs73214120	0.80[EUR][1000 genomes]
rs73226285	0.80[EUR][1000 genomes]
rs73226294	0.80[EUR][1000 genomes]
rs73228103	0.80[EUR][1000 genomes]
rs73440955	0.93[EUR][1000 genomes]
rs73440957	0.93[EUR][1000 genomes]
rs73440958	0.93[EUR][1000 genomes]
rs73440961	0.93[EUR][1000 genomes]
rs73717744	1.00[EUR][1000 genomes]
rs7809545	1.00[EUR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121624000-121647800	Strong transcription	Cortex derived primary cultured neurospheres	brain
2	chr7:121625000-121650800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:121626000-121650600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr7:121626000-121651000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr7:121626400-121650400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:121627800-121650600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr7:121628200-121650000	Weak transcription	Brain Germinal Matrix	brain
8	chr7:121629000-121650000	Weak transcription	Fetal Brain Female	brain
9	chr7:121632400-121645800	Weak transcription	NHEK	skin
10	chr7:121632400-121646400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:121633200-121649200	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr7:121634400-121706000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr7:121635200-121647400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr7:121635400-121650800	Weak transcription	Fetal Brain Male	brain
15	chr7:121637600-121646600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr7:121639200-121650400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr7:121639600-121645400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr7:121639600-121646200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr7:121639600-121646400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr7:121639600-121649000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr7:121639600-121650000	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr7:121639800-121650200	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr7:121640200-121649000	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr7:121640600-121645000	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr7:121641400-121644200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links