Variant report
| Variant | rs1038066 |
|---|---|
| Chromosome Location | chr12:31628073-31628074 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:31542400-31645000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr12:31562400-31644400 | Weak transcription | Brain Substantia Nigra | brain |
| 3 | chr12:31567400-31635800 | Weak transcription | Osteobl | bone |
| 4 | chr12:31567800-31642800 | Weak transcription | Brain Hippocampus Middle | brain |
| 5 | chr12:31572000-31631200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 6 | chr12:31572000-31631200 | Weak transcription | HSMMtube | muscle |
| 7 | chr12:31572400-31628400 | Weak transcription | Right Ventricle | heart |
| 8 | chr12:31572400-31631200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 9 | chr12:31577800-31649400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr12:31579000-31632000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 11 | chr12:31579400-31632000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 12 | chr12:31583400-31662000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr12:31585000-31631600 | Weak transcription | Brain Anterior Caudate | brain |
| 14 | chr12:31585000-31642000 | Weak transcription | Fetal Kidney | kidney |
| 15 | chr12:31585400-31631800 | Weak transcription | Fetal Lung | lung |
| 16 | chr12:31586200-31635800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 17 | chr12:31594400-31648400 | Weak transcription | Small Intestine | intestine |
| 18 | chr12:31600600-31630400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr12:31600600-31632000 | Weak transcription | Brain Germinal Matrix | brain |
| 20 | chr12:31600800-31631600 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr12:31603800-31632600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 22 | chr12:31605400-31630800 | Weak transcription | Fetal Muscle Leg | muscle |
| 23 | chr12:31605400-31631200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr12:31605400-31647200 | Weak transcription | Psoas Muscle | Psoas |
| 25 | chr12:31605600-31632000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 26 | chr12:31605600-31632200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 27 | chr12:31605600-31637000 | Weak transcription | Fetal Stomach | stomach |
| 28 | chr12:31607400-31631200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr12:31608600-31632000 | Weak transcription | Placenta | Placenta |
| 30 | chr12:31610200-31632000 | Weak transcription | Ovary | ovary |
| 31 | chr12:31613400-31631200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 32 | chr12:31613400-31632000 | Weak transcription | HSMM | muscle |
| 33 | chr12:31613600-31629400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 34 | chr12:31615400-31632000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr12:31618200-31632200 | Weak transcription | Aorta | Aorta |
| 36 | chr12:31619000-31632200 | Weak transcription | Fetal Brain Female | brain |
| 37 | chr12:31619600-31635800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 38 | chr12:31620000-31631200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 39 | chr12:31620000-31635600 | Weak transcription | HUVEC | blood vessel |
| 40 | chr12:31620200-31644800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 41 | chr12:31620600-31631400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 42 | chr12:31622400-31628600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 43 | chr12:31622800-31629000 | Weak transcription | GM12878-XiMat | blood |
| 44 | chr12:31623000-31635800 | Weak transcription | NHEK | skin |
| 45 | chr12:31623800-31630200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 46 | chr12:31624000-31628400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 47 | chr12:31624200-31632200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 48 | chr12:31624400-31629600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 49 | chr12:31625200-31628400 | Strong transcription | Primary B cells from peripheral blood | blood |
| 50 | chr12:31625400-31628400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
