Variant report

Variant rs12299050
Chromosome Location chr12:31663374-31663375
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:31642600-31670000 Weak transcription Fetal Lung lung
2 chr12:31658800-31671600 Weak transcription Primary B cells from cord blood blood
3 chr12:31659200-31663400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr12:31659200-31670600 Weak transcription Fetal Intestine Small intestine
5 chr12:31659400-31663600 Enhancers HUES64 Cell Line embryonic stem cell
6 chr12:31659800-31663600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr12:31660000-31663800 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr12:31660000-31663800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
9 chr12:31660000-31663800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr12:31660000-31674600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr12:31660400-31670200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr12:31660400-31670800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr12:31660800-31663400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr12:31660800-31664000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr12:31661000-31663600 Enhancers Fetal Heart heart
16 chr12:31661200-31663400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
17 chr12:31661800-31663400 Weak transcription Stomach Smooth Muscle stomach
18 chr12:31661800-31663800 Enhancers Colon Smooth Muscle Colon
19 chr12:31661800-31670000 Weak transcription Fetal Kidney kidney
20 chr12:31661800-31670800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:31662000-31663600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr12:31662000-31663600 Enhancers Psoas Muscle Psoas
23 chr12:31662200-31663400 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr12:31662200-31663600 Enhancers Primary B cells from peripheral blood blood
25 chr12:31662200-31663600 Enhancers Duodenum Smooth Muscle Duodenum
26 chr12:31662200-31663600 Enhancers Ovary ovary
27 chr12:31662200-31663600 Enhancers Right Atrium heart
28 chr12:31662200-31663600 Enhancers Right Ventricle heart
29 chr12:31662200-31663600 Enhancers Skeletal Muscle Female skeletal muscle
30 chr12:31662200-31670200 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr12:31662200-31671600 Weak transcription HepG2 liver
32 chr12:31662400-31663400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:31662400-31663800 Enhancers A549 lung
34 chr12:31662400-31670200 Weak transcription H9 Cell Line embryonic stem cell
35 chr12:31662400-31670200 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr12:31662600-31666200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr12:31662800-31663400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr12:31662800-31663600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr12:31662800-31663600 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr12:31662800-31663600 Enhancers NHDF-Ad bronchial
41 chr12:31663000-31663400 Active TSS Rectal Smooth Muscle rectum
42 chr12:31663000-31663600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr12:31663000-31663600 Enhancers Aorta Aorta
44 chr12:31663000-31663600 Weak transcription Duodenum Mucosa Duodenum
45 chr12:31663000-31670000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr12:31663000-31670200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr12:31663200-31663600 Enhancers Left Ventricle heart
48 chr12:31663200-31666400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr12:31663200-31668600 Weak transcription Hela-S3 cervix
50 chr12:31663200-31669800 Weak transcription Cortex derived primary cultured neurospheres brain

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