Variant report

Variant	rs1039225
Chromosome Location	chr12:49582692-49582693
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RCOR1	chr12:49581855-49583176	GM12878	blood:	n/a	n/a
2	CTCF	chr12:49582621-49582873	K562	blood:	n/a	n/a
3	TCF12	chr12:49582103-49583102	ECC-1	luminal epithelium:	n/a	chr12:49582311-49582321
4	PBX3	chr12:49582537-49583331	SK-N-SH	brain:	n/a	n/a
5	ATF2	chr12:49582511-49583226	H1-hESC	embryonic stem cell:	n/a	n/a
6	POU2F2	chr12:49582667-49582939	GM12878	blood:	n/a	n/a
7	PML	chr12:49581641-49583317	GM12878	blood:	n/a	chr12:49582958-49582966
8	POLR2A	chr12:49581841-49583183	PBDE	blood:	n/a	n/a
9	RAD21	chr12:49582621-49583214	SK-N-SH_RA	brain:	n/a	chr12:49582706-49582716
10	MAX	chr12:49582673-49583076	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr12:49582635-49583178	GM12878	blood:	n/a	n/a
12	EGR1	chr12:49581671-49583337	HCT-116	colon:	n/a	chr12:49582322-49582335 chr12:49582321-49582336 chr12:49582477-49582487 chr12:49582323-49582333 chr12:49582322-49582335 chr12:49583014-49583027 chr12:49582297-49582310 chr12:49582294-49582308 chr12:49582321-49582335 chr12:49582317-49582339 chr12:49582323-49582332 chr12:49582322-49582335 chr12:49582597-49582607 chr12:49582323-49582333
13	POLR2A	chr12:49582186-49583037	NB4	blood:	n/a	n/a
14	TAF1	chr12:49582602-49583168	PFSK-1	brain:	n/a	n/a
15	REST	chr12:49582127-49583028	HL-60	blood:	n/a	chr12:49582472-49582485
16	YY1	chr12:49582549-49583332	SK-N-SH_RA	brain:	n/a	chr12:49582595-49582606 chr12:49582592-49582603 chr12:49582597-49582606 chr12:49582780-49582799 chr12:49582594-49582603
17	POLR2A	chr12:49581767-49583242	Raji	blood:	n/a	n/a
18	POLR2A	chr12:49580801-49583893	HUVEC	blood vessel:	n/a	n/a
19	CTCF	chr12:49582620-49582770	HRPEpiC	eye:	n/a	n/a
20	CTBP2	chr12:49582507-49583099	H1-hESC	embryonic stem cell:	n/a	n/a
21	FOXA2	chr12:49582571-49583113	A549	lung:	n/a	n/a
22	FOXM1	chr12:49582154-49583163	GM12878	blood:	n/a	n/a
23	NFIC	chr12:49581810-49583271	GM12878	blood:	n/a	n/a
24	YY1	chr12:49582567-49583493	SK-N-SH_RA	brain:	n/a	chr12:49582595-49582606 chr12:49582592-49582603 chr12:49582597-49582606 chr12:49582780-49582799 chr12:49582594-49582603
25	YY1	chr12:49582314-49583176	GM12878	blood:	n/a	chr12:49582595-49582606 chr12:49582592-49582603 chr12:49582597-49582606 chr12:49582780-49582799 chr12:49582594-49582603
26	POLR2A	chr12:49582085-49583271	PFSK-1	brain:	n/a	n/a
27	TCF7L2	chr12:49581858-49583054	PANC-1	pancreas:	n/a	chr12:49582524-49582534
28	POLR2A	chr12:49582523-49583285	SK-N-MC	brain:	n/a	n/a
29	POLR2A	chr12:49580537-49583713	H1-neurons	neurons:	n/a	n/a
30	NFATC1	chr12:49582593-49583056	GM12878	blood:	n/a	n/a
31	POLR2A	chr12:49582219-49583157	H1-hESC	embryonic stem cell:	n/a	n/a
32	MAX	chr12:49582620-49583065	NB4	blood:	n/a	n/a
33	POLR2A	chr12:49582099-49583017	ECC-1	luminal epithelium:	n/a	n/a
34	TCF7L2	chr12:49582508-49583054	HEK293	kidney:	n/a	chr12:49582524-49582534
35	CEBPB	chr12:49582570-49583183	H1-hESC	embryonic stem cell:	n/a	n/a
36	YY1	chr12:49582660-49583202	K562	blood:	n/a	chr12:49582780-49582799
37	PBX3	chr12:49582527-49583264	SK-N-SH	brain:	n/a	n/a
38	CREB1	chr12:49581985-49583221	GM12878	blood:	n/a	n/a
39	POLR2A	chr12:49582683-49582925	A549	lung:	n/a	n/a
40	YY1	chr12:49582572-49583230	ECC-1	luminal epithelium:	n/a	chr12:49582595-49582606 chr12:49582592-49582603 chr12:49582597-49582606 chr12:49582780-49582799 chr12:49582594-49582603
41	MXI1	chr12:49582673-49583052	H1-hESC	embryonic stem cell:	n/a	n/a
42	BHLHE40	chr12:49582448-49583052	GM12878	blood:	n/a	chr12:49582545-49582561
43	ZBTB7A	chr12:49581685-49582905	ECC-1	luminal epithelium:	n/a	chr12:49582708-49582717
44	UBTF	chr12:49581845-49583000	K562	blood:	n/a	n/a
45	POLR2A	chr12:49582119-49583159	H1-hESC	embryonic stem cell:	n/a	n/a
46	POLR2A	chr12:49579939-49583650	SK-N-SH	brain:	n/a	n/a
47	BCL3	chr12:49582490-49583104	A549	lung:	n/a	chr12:49582587-49582600 chr12:49582592-49582601 chr12:49582595-49582604 chr12:49582590-49582603
48	MXI1	chr12:49582603-49583005	GM12878	blood:	n/a	n/a
49	SP1	chr12:49582671-49583152	GM12878	blood:	n/a	chr12:49583106-49583118 chr12:49583119-49583128 chr12:49583107-49583117 chr12:49583107-49583116 chr12:49583108-49583117 chr12:49583108-49583117 chr12:49583106-49583118
50	ELF1	chr12:49582590-49583190	A549	lung:	n/a	chr12:49582595-49582607 chr12:49582592-49582604 chr12:49582594-49582603

No.	Distal block	Cell Line	Cell type
1	chr12:49580754..49584871-chr12:49657957..49661825,4	MCF-7	breast:
2	chr12:49520168..49522237-chr12:49581015..49583384,2	K562	blood:
3	chr12:49523298..49526534-chr12:49578242..49583023,5	K562	blood:
4	chr12:49523189..49526160-chr12:49580301..49583522,3	K562	blood:
5	chr12:49582394..49583182-chr16:30886240..30886802,2	HCT-116	colon:
6	chr12:49581100..49585285-chr12:49656726..49660800,10	MCF-7	breast:
7	chr12:49522685..49527255-chr12:49580115..49585539,18	MCF-7	breast:
8	chr12:49580809..49583875-chr12:49657471..49661424,5	K562	blood:
9	chr12:49453107..49454677-chr12:49580973..49582766,2	K562	blood:
10	chr12:49581145..49584248-chr12:49657471..49660758,4	K562	blood:
11	chr12:49581406..49583552-chr12:49621389..49622908,2	MCF-7	breast:
12	chr12:49522957..49526705-chr12:49580771..49584514,11	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TUBA1C-3	chr12:49582519-49583008	NONHSAT028085

Variant related genes	Relation type
TUBA1A	TF binding region
ENSG00000265991	Chromatin interaction
ENSG00000260083	Chromatin interaction
ENSG00000200309	Chromatin interaction
ENSG00000123416	Chromatin interaction
ENSG00000258101	Chromatin interaction
ENSG00000167548	Chromatin interaction
ENSG00000258017	Chromatin interaction
ENSG00000167553	Chromatin interaction

Extended variants
information (count: 94 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:90)

rs_ID	r²[population]
rs10747561	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap]
rs10747562	0.88[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.84[JPT][hapmap]
rs10747563	0.83[CEU][hapmap];0.94[CHB][hapmap];0.80[JPT][hapmap];0.81[ASN][1000 genomes]
rs10783302	1.00[CHB][hapmap];0.91[CHD][hapmap];0.95[JPT][hapmap]
rs10783307	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs10783308	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.86[MEX][hapmap];0.85[TSI][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10875922	0.84[EUR][1000 genomes]
rs10875924	0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10875925	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10875927	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10875928	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.86[MEX][hapmap];0.85[TSI][hapmap];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10875929	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10875930	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10875931	0.92[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.85[TSI][hapmap];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10875934	0.94[CHB][hapmap];0.88[CHD][hapmap];0.80[JPT][hapmap];0.81[ASN][1000 genomes]
rs11168857	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];0.97[LWK][hapmap];0.98[MKK][hapmap];0.82[TSI][hapmap]
rs11168862	0.83[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.84[JPT][hapmap]
rs11168874	0.86[EUR][1000 genomes]
rs11168882	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11168883	0.86[EUR][1000 genomes]
rs11168884	0.92[CEU][hapmap];0.94[CHB][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11168885	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11168888	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11168890	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11168893	0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap]
rs11168894	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11168895	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11168901	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11168902	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11168903	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168904	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11168909	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11168910	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11168911	0.81[ASN][1000 genomes]
rs11168917	0.81[ASN][1000 genomes]
rs11168919	0.81[ASN][1000 genomes]
rs11837207	0.82[EUR][1000 genomes]
rs12227296	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12227610	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12227770	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12228775	0.80[EUR][1000 genomes]
rs12229524	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.90[JPT][hapmap];0.95[MEX][hapmap];0.92[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12229529	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs12306494	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12309994	0.81[ASN][1000 genomes]
rs12318740	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12579015	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1476137	0.92[CEU][hapmap];0.81[EUR][1000 genomes]
rs1874908	0.92[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.85[TSI][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1991427	1.00[CEU][hapmap];0.94[CHB][hapmap];0.85[JPT][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1991428	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2016107	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2047101	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2114845	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2114846	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2162643	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2162644	1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2241727	0.83[EUR][1000 genomes]
rs2279596	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap]
rs2334930	0.92[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.86[MEX][hapmap];0.85[TSI][hapmap];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2334931	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2753	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.90[JPT][hapmap];0.82[MEX][hapmap];0.81[TSI][hapmap]
rs2878287	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35884657	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3741621	0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.83[GIH][hapmap];0.95[JPT][hapmap];0.82[LWK][hapmap];0.84[TSI][hapmap]
rs56149019	0.81[ASN][1000 genomes]
rs58336603	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58711211	0.81[EUR][1000 genomes]
rs6580701	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6580703	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs697624	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7137978	0.81[EUR][1000 genomes]
rs7306084	0.83[CEU][hapmap];0.94[CHB][hapmap];0.80[JPT][hapmap];0.81[ASN][1000 genomes]
rs73110168	0.84[EUR][1000 genomes]
rs7311346	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs731350	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes]
rs7953169	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7954521	0.92[CEU][hapmap];0.94[CHB][hapmap];0.85[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7954530	0.92[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7957998	0.91[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7958241	0.96[CEU][hapmap];0.94[CHB][hapmap];0.91[CHD][hapmap];0.84[JPT][hapmap]
rs7958572	0.88[CEU][hapmap]
rs7959497	0.92[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap]
rs7969963	0.82[EUR][1000 genomes]
rs7969967	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.83[GIH][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap];0.82[EUR][1000 genomes]
rs7978448	0.96[CEU][hapmap]
rs9325145	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap];0.82[EUR][1000 genomes]
rs9739878	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9788139	0.81[EUR][1000 genomes]
rs9788140	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051161	chr12:49314550-49828473	Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
2	nsv541489	chr12:49314550-49828473	Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
3	nsv1036452	chr12:49376285-49867760	Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	315 gene(s)	inside rSNPs	diseases
4	nsv428801	chr12:49536659-49744884	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs1039225	K-ALPHA-1	cis	multi-tissue	Pritchard
rs1039225	RHEBL1	cis	parietal	SCAN
rs1039225	OR10AD1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:49579600-49584400	Active TSS	Brain Angular Gyrus	brain
2	chr12:49580200-49583600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr12:49580400-49583800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr12:49580400-49583800	Active TSS	Brain Substantia Nigra	brain
5	chr12:49580400-49584200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
6	chr12:49580400-49584600	Active TSS	Fetal Brain Male	brain
7	chr12:49580600-49583000	Bivalent/Poised TSS	Brain Germinal Matrix	brain
8	chr12:49580600-49583400	Active TSS	NHLF	lung
9	chr12:49580600-49584000	Active TSS	Brain Hippocampus Middle	brain
10	chr12:49580600-49584200	Active TSS	Brain Anterior Caudate	brain
11	chr12:49580800-49583200	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr12:49580800-49583400	Active TSS	Colon Smooth Muscle	Colon
13	chr12:49581000-49583200	Active TSS	Colonic Mucosa	Colon
14	chr12:49581000-49583400	Bivalent/Poised TSS	Fetal Intestine Large	intestine
15	chr12:49581000-49583600	Active TSS	Fetal Muscle Trunk	muscle
16	chr12:49581000-49583800	Active TSS	NHDF-Ad	bronchial
17	chr12:49581200-49582800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr12:49581200-49583000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr12:49581200-49583000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr12:49581200-49583200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr12:49581200-49583200	Active TSS	iPS-20b Cell Line	embryonic stem cell
22	chr12:49581200-49583200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr12:49581200-49583200	Active TSS	Left Ventricle	heart
24	chr12:49581200-49583200	Active TSS	Lung	lung
25	chr12:49581200-49583200	Active TSS	HSMM	muscle
26	chr12:49581200-49583400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr12:49581200-49583400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr12:49581200-49583400	Active TSS	Pancreatic Islets	Pancreatic Islet
29	chr12:49581200-49583400	Active TSS	Rectal Smooth Muscle	rectum
30	chr12:49581200-49583400	Active TSS	Right Ventricle	heart
31	chr12:49581200-49583400	Active TSS	HSMMtube	muscle
32	chr12:49581200-49583600	Active TSS	Muscle Satellite Cultured Cells	--
33	chr12:49581200-49583600	Active TSS	Aorta	Aorta
34	chr12:49581200-49583800	Active TSS	Brain Inferior Temporal Lobe	brain
35	chr12:49581200-49584000	Active TSS	Brain Cingulate Gyrus	brain
36	chr12:49581400-49582800	Active TSS	Fetal Heart	heart
37	chr12:49581400-49582800	Active TSS	Placenta	Placenta
38	chr12:49581400-49583000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr12:49581400-49583000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
40	chr12:49581400-49583200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr12:49581400-49583200	Active TSS	Primary monocytes fromperipheralblood	blood
42	chr12:49581400-49583200	Active TSS	Fetal Muscle Leg	muscle
43	chr12:49581400-49583200	Active TSS	Fetal Stomach	stomach
44	chr12:49581400-49583200	Active TSS	Fetal Thymus	thymus
45	chr12:49581400-49583200	Active TSS	GM12878-XiMat	blood
46	chr12:49581400-49583200	Active TSS	HMEC	breast
47	chr12:49581400-49583200	Active TSS	HUVEC	blood vessel
48	chr12:49581400-49583400	Active TSS	H1 Cell Line	embryonic stem cell
49	chr12:49581400-49583400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr12:49581400-49583400	Active TSS	HUES6 Cell Line	embryonic stem cell

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