The 2.0 version of rSNPBase

Variant report

Variant rs1476137
Chromosome Location chr12:49523713-49523714
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49521200-49523800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr12:49522000-49524200 Weak transcription Ovary ovary
3 chr12:49522400-49523800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr12:49522600-49524400 Transcr. at gene 5' and 3' Hela-S3 cervix
5 chr12:49522800-49523800 Genic enhancers Primary B cells from peripheral blood blood
6 chr12:49522800-49523800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr12:49522800-49523800 Strong transcription Gastric stomach
8 chr12:49522800-49524000 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr12:49522800-49524000 Transcr. at gene 5' and 3' GM12878-XiMat blood
10 chr12:49522800-49524400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
11 chr12:49522800-49524400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr12:49522800-49524400 Transcr. at gene 5' and 3' HMEC breast
13 chr12:49522800-49524400 Transcr. at gene 5' and 3' Osteobl bone
14 chr12:49522800-49524600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
15 chr12:49522800-49524600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
16 chr12:49522800-49524600 Transcr. at gene 5' and 3' NH-A brain
17 chr12:49522800-49524800 Transcr. at gene 5' and 3' A549 lung
18 chr12:49522800-49525200 Transcr. at gene 5' and 3' Dnd41 blood
19 chr12:49523000-49523800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr12:49523000-49523800 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
21 chr12:49523000-49523800 Genic enhancers Pancreas Pancrea
22 chr12:49523000-49523800 Genic enhancers Spleen Spleen
23 chr12:49523000-49524000 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr12:49523000-49524000 Transcr. at gene 5' and 3' Brain Angular Gyrus brain
25 chr12:49523000-49524000 Transcr. at gene 5' and 3' Brain Dorsolateral Prefrontal Cortex brain
26 chr12:49523000-49524400 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr12:49523000-49524400 Transcr. at gene 5' and 3' HUVEC blood vessel
28 chr12:49523000-49524400 Transcr. at gene 5' and 3' NHLF lung
29 chr12:49523000-49524600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr12:49523000-49524800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
31 chr12:49523200-49523800 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
32 chr12:49523200-49523800 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
33 chr12:49523200-49523800 Transcr. at gene 5' and 3' Brain Anterior Caudate brain
34 chr12:49523200-49523800 Genic enhancers Placenta Placenta
35 chr12:49523200-49524000 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr12:49523200-49524000 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr12:49523200-49524000 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:49523200-49524000 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
39 chr12:49523200-49524000 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
40 chr12:49523200-49524400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr12:49523200-49524400 Transcr. at gene 5' and 3' HSMM muscle
42 chr12:49523200-49524600 Transcr. at gene 5' and 3' K562 blood
43 chr12:49523200-49525000 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
44 chr12:49523200-49525200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
45 chr12:49523400-49523800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr12:49523400-49523800 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
47 chr12:49523400-49523800 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
48 chr12:49523400-49523800 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
49 chr12:49523400-49523800 Transcr. at gene 5' and 3' Brain Inferior Temporal Lobe brain
50 chr12:49523400-49523800 Transcr. at gene 5' and 3' Fetal Brain Female brain

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Last update: Aug 31, 2015