Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10504805	0.91[ASN][1000 genomes]
rs1320769	1.00[ASN][1000 genomes]
rs1320770	1.00[ASN][1000 genomes]
rs13250018	0.89[ASN][1000 genomes]
rs13264793	0.98[ASN][1000 genomes]
rs1503600	1.00[ASN][1000 genomes]
rs1503601	0.99[ASN][1000 genomes]
rs1847344	1.00[ASN][1000 genomes]
rs1947960	1.00[ASN][1000 genomes]
rs2046313	0.91[ASN][1000 genomes]
rs4740023	0.82[ASN][1000 genomes]
rs4740024	0.82[ASN][1000 genomes]
rs60533047	0.82[ASN][1000 genomes]
rs6473555	0.89[ASN][1000 genomes]
rs711025	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs711027	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs711052	0.80[EUR][1000 genomes]
rs711054	0.85[EUR][1000 genomes]
rs711059	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs711060	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7820792	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831375	chr8:85272352-85463621	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3481417	chr8:85279453-86145229	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	esv3481418	chr8:85279453-86145229	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85436200-85461200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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