The 2.0 version of rSNPBase

Variant report

Variant rs10399689
Chromosome Location chr1:91995864-91995865
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:91967800-92009600 Weak transcription Thymus Thymus
2 chr1:91983000-92002600 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:91984400-91998000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:91984600-91997800 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr1:91985000-92000400 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:91989200-91997800 Weak transcription Primary hematopoietic stem cells blood
7 chr1:91989400-91997200 Weak transcription GM12878-XiMat blood
8 chr1:91989400-92002800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:91990000-91999400 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:91990800-91998000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:91990800-91998000 Weak transcription Fetal Heart heart
12 chr1:91990800-92000800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:91991000-91996400 Weak transcription Dnd41 blood
14 chr1:91991200-91997800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:91991600-91996000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:91993200-91997800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:91994600-92002200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:91994800-91996000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:91994800-91997800 Weak transcription Fetal Kidney kidney
20 chr1:91995200-91996000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:91995200-91996200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:91995200-91996200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:91995200-91996200 Enhancers HMEC breast
24 chr1:91995200-91996400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:91995200-91996400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:91995400-91996000 Enhancers Hela-S3 cervix
27 chr1:91995400-91996200 Enhancers Primary T cells from cord blood blood
28 chr1:91995400-91996200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:91995400-91996200 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr1:91995400-91996200 Enhancers NHEK skin
31 chr1:91995400-91996400 Enhancers Primary T helper cells fromperipheralblood blood
32 chr1:91995400-91996600 Enhancers A549 lung
33 chr1:91995400-92002200 Weak transcription NHDF-Ad bronchial
34 chr1:91995400-92002400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:91995600-91996000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr1:91995600-91996200 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr1:91995600-91996400 Enhancers Primary T cells fromperipheralblood blood
38 chr1:91995800-91996000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr1:91995800-91996000 Enhancers HSMM muscle
40 chr1:91995800-91996200 Enhancers Primary T helper cells PMA-I stimulated --
41 chr1:91995800-91996400 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr1:91995800-92001200 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr1:91995800-92003000 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015