The 2.0 version of rSNPBase

Variant report

Variant rs11164877
Chromosome Location chr1:91985092-91985093
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:91967200-91989000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:91967400-91989000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:91967600-91990600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:91967800-92009600 Weak transcription Thymus Thymus
5 chr1:91968000-91991600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:91968200-91987400 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:91968400-91992000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:91968600-91986400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:91968600-91989000 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr1:91968600-91991000 Weak transcription Fetal Stomach stomach
11 chr1:91968800-91989000 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr1:91968800-91991200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:91969200-91989000 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:91970800-91988800 Weak transcription Fetal Brain Male brain
15 chr1:91971000-91989000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr1:91971000-91991200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:91972400-91992400 Weak transcription Fetal Muscle Trunk muscle
18 chr1:91972800-91989000 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:91973000-91986800 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:91973400-91987000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:91974400-91992000 Weak transcription HUVEC blood vessel
22 chr1:91974800-91991000 Strong transcription Dnd41 blood
23 chr1:91975000-91995200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:91975600-91991600 Weak transcription NHLF lung
25 chr1:91977600-91992600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:91977800-91995200 Weak transcription HMEC breast
27 chr1:91978200-91986000 Weak transcription Left Ventricle heart
28 chr1:91978800-91993400 Weak transcription Osteobl bone
29 chr1:91979600-91985200 Weak transcription Rectal Smooth Muscle rectum
30 chr1:91980000-91985200 Weak transcription Colon Smooth Muscle Colon
31 chr1:91980000-91991600 Weak transcription Placenta Placenta
32 chr1:91980200-91992000 Weak transcription Fetal Kidney kidney
33 chr1:91980400-91991600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:91980600-91986400 Weak transcription Fetal Heart heart
35 chr1:91980600-91992400 Weak transcription Primary monocytes fromperipheralblood blood
36 chr1:91980600-91995800 Weak transcription HSMM muscle
37 chr1:91981000-91986400 Weak transcription NHDF-Ad bronchial
38 chr1:91981000-91991600 Weak transcription Brain Germinal Matrix brain
39 chr1:91981000-91995200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:91982600-91988000 Weak transcription Fetal Brain Female brain
41 chr1:91983000-92002600 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr1:91983200-91988400 Weak transcription A549 lung
43 chr1:91983200-91988600 Weak transcription Primary hematopoietic stem cells blood
44 chr1:91983200-91989000 Weak transcription Primary T cells from cord blood blood
45 chr1:91983200-91989600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr1:91983200-91995400 Weak transcription Hela-S3 cervix
47 chr1:91983200-91995400 Weak transcription NHEK skin
48 chr1:91983400-91986400 Weak transcription H1 Cell Line embryonic stem cell
49 chr1:91983400-91986400 Weak transcription K562 blood
50 chr1:91983400-91988000 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015