The 2.0 version of rSNPBase

Variant report

Variant rs12046667
Chromosome Location chr1:91975474-91975475
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:91967200-91980800 Weak transcription Gastric stomach
2 chr1:91967200-91989000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:91967400-91977600 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:91967400-91978200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:91967400-91984800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:91967400-91989000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:91967600-91980400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:91967600-91990600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:91967800-91976000 Weak transcription Brain Hippocampus Middle brain
10 chr1:91967800-91979200 Weak transcription Primary B cells from cord blood blood
11 chr1:91967800-91982400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:91967800-91983000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr1:91967800-92009600 Weak transcription Thymus Thymus
14 chr1:91968000-91982800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:91968000-91983000 Weak transcription Fetal Muscle Leg muscle
16 chr1:91968000-91984400 Weak transcription Fetal Intestine Large intestine
17 chr1:91968000-91991600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:91968200-91987400 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:91968400-91979800 Weak transcription HSMM muscle
20 chr1:91968400-91984800 Weak transcription NH-A brain
21 chr1:91968400-91992000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:91968600-91976200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:91968600-91977600 Weak transcription Fetal Kidney kidney
24 chr1:91968600-91978600 Weak transcription NHEK skin
25 chr1:91968600-91979200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr1:91968600-91979800 Weak transcription Duodenum Mucosa Duodenum
27 chr1:91968600-91980800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:91968600-91982600 Weak transcription HepG2 liver
29 chr1:91968600-91984600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:91968600-91986400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:91968600-91989000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr1:91968600-91991000 Weak transcription Fetal Stomach stomach
33 chr1:91968800-91976800 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:91968800-91978400 Weak transcription Fetal Lung lung
35 chr1:91968800-91978600 Weak transcription A549 lung
36 chr1:91968800-91980200 Weak transcription Brain Anterior Caudate brain
37 chr1:91968800-91982200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:91968800-91989000 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr1:91968800-91991200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:91969200-91989000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:91970800-91984600 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr1:91970800-91988800 Weak transcription Fetal Brain Male brain
43 chr1:91971000-91989000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr1:91971000-91991200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:91971400-91978600 Weak transcription Primary hematopoietic stem cells blood
46 chr1:91971400-91983000 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr1:91971800-91978600 Weak transcription GM12878-XiMat blood
48 chr1:91972200-91976200 Weak transcription NHDF-Ad bronchial
49 chr1:91972200-91982000 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr1:91972400-91978600 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015