Variant report

Variant	rs1040940
Chromosome Location	chr6:44539645-44539646
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1322662	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1407562	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1407563	0.90[ASN][1000 genomes]
rs164673	1.00[ASN][1000 genomes]
rs164674	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs164680	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs184475	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1853307	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs326801	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326802	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326803	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326804	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326805	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326806	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326807	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326814	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs326817	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56929175	0.98[AFR][1000 genomes]
rs927486	0.81[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44538600-44544400	Weak transcription	Brain Substantia Nigra	brain
2	chr6:44539600-44540200	Enhancers	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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