Variant report

Variant rs10410393
Chromosome Location chr19:52385677-52385678
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52348800-52406800 ZNF genes & repeats Liver Liver
2 chr19:52357800-52407400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:52358200-52407400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
4 chr19:52363200-52386200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
5 chr19:52366800-52406600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:52371200-52386000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
7 chr19:52372600-52386000 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
8 chr19:52373000-52386000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:52373200-52406400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
10 chr19:52374400-52386800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr19:52375000-52386200 ZNF genes & repeats Ovary ovary
12 chr19:52375000-52386400 ZNF genes & repeats Primary hematopoietic stem cells blood
13 chr19:52375400-52387200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
14 chr19:52375600-52387200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:52375800-52386200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
16 chr19:52379000-52389200 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr19:52379200-52390600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr19:52380800-52390200 Weak transcription Right Atrium heart
19 chr19:52380800-52390600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr19:52382000-52386200 Strong transcription H9 Cell Line embryonic stem cell
21 chr19:52382000-52386200 Strong transcription Brain Angular Gyrus brain
22 chr19:52382000-52390200 Weak transcription Fetal Kidney kidney
23 chr19:52382000-52390400 Weak transcription Osteobl bone
24 chr19:52382200-52390200 Weak transcription Fetal Heart heart
25 chr19:52382200-52390400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr19:52383000-52386000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
27 chr19:52383000-52386200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
28 chr19:52383000-52386200 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
29 chr19:52383000-52387800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
30 chr19:52383200-52390400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr19:52383200-52390600 Weak transcription Placenta Placenta
32 chr19:52383400-52390200 Weak transcription Fetal Brain Male brain
33 chr19:52383600-52385800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr19:52383600-52388600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr19:52383600-52389400 Weak transcription K562 blood
36 chr19:52383600-52390000 Weak transcription HSMM muscle
37 chr19:52383600-52390400 Weak transcription Right Ventricle heart
38 chr19:52383800-52390400 Weak transcription Muscle Satellite Cultured Cells --
39 chr19:52383800-52390400 Weak transcription Fetal Muscle Trunk muscle
40 chr19:52384000-52385800 Weak transcription HSMMtube muscle
41 chr19:52384000-52390000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr19:52384000-52390000 Weak transcription Brain Germinal Matrix brain
43 chr19:52384200-52386200 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr19:52384200-52390000 Weak transcription Psoas Muscle Psoas
45 chr19:52384200-52390000 Weak transcription Stomach Smooth Muscle stomach
46 chr19:52384200-52390200 Weak transcription Rectal Smooth Muscle rectum
47 chr19:52384200-52390400 Weak transcription Fetal Muscle Leg muscle
48 chr19:52384200-52390600 Weak transcription Left Ventricle heart
49 chr19:52384200-52390600 Weak transcription Placenta Amnion Placenta Amnion
50 chr19:52384400-52386000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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